RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 GTF2H4Q92759 462 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 PIGLQ9Y2B2 252 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 PCDHGA5Q9Y5G8 931 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 USP3Q9Y6I4 520 aa10.39□□□□□ -0.75
PTCH1-205ENST00000418258 DVL1O14640 695 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 DEGS1O15121 323 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 F11P03951 625 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 GIFP27352 417 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 DVL1P1P54792 670 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 GABREP78334 506 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 MRPS34P82930 218 aaKnown RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 MPPED2Q15777 294 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF813Q6ZN06 617 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 PGAP1Q75T13 922 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 FCRLAQ7L513 359 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 BIRC8Q96P09 236 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 ALG12Q9BV10 488 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 BARHL1Q9BZE3 327 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 TPRP12270 2363 aaKnown RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 TNFRSF10AO00220 468 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 PLA2G7Q13093 441 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 MAFAQ8NHW3 353 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 SHISA4Q96DD7 197 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 GORASP2Q9H8Y8 452 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 C1orf123Q9NWV4 160 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 TRBV4-1A0A0J9YWV2 114 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 TNFSF15O95150 251 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 BMP2P12643 396 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 MFGE8Q08431 387 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 CMIPQ8IY22 773 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 CMTM2Q8TAZ6 248 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 UTP4Q969X6 686 aaKnown RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 SHARPINQ9H0F6 387 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 NIPAL2Q9H841 368 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 WDR76Q9H967 626 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 OBP2AQ9NY56 170 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 ADAM29Q9UKF5 820 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 MMACHCQ9Y4U1 282 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 GPR45Q9Y5Y3 372 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 LCMT2O60294 686 aaKnown RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 OR8U8P0C7N1 319 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 OR8G3PP0DMU2 310 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 ACP2P11117 423 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 BLVRBP30043 206 aaPredicted RBP10.38□□□□□ -0.75
PTCH1-205ENST00000418258 OR56B1Q8NGI3 324 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 OR51E2Q9H255 320 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 MED6O75586 246 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 RGS11O94810 467 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 GABRA4P48169 554 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 ADPRHP54922 357 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 KCNIP4Q6PIL6 250 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 IL34Q6ZMJ4 242 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 BPIFB2Q8N4F0 458 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 ABHD4Q8TB40 342 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 FNDC8Q8TC99 324 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 E9PI62 339 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 HBG1P69891 147 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 HBG2P69892 147 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 FOXC1Q12948 553 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 SLC37A2Q8TED4 501 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 SLC38A5Q8WUX1 472 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 C11orf40Q8WZ69 217 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 UHRF2Q96PU4 802 aa10.38□□□□□ -0.75
PTCH1-205ENST00000418258 IGHV3-20A0A0C4DH32 117 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 OR5H15A6NDH6 313 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 OR5H14A6NHG9 310 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 OR5H1A6NKK0 313 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 CACNG3O60359 315 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF74Q16587 644 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 BEX5Q5H9J7 111 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 FRMD1Q8N878 549 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 TRGV8A0A0C4DH27 118 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 IMPA1P29218 277 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 PPIAP62937 165 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 PEA15Q15121 130 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 NKAIN1Q4KMZ8 207 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 YRDCQ86U90 279 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 LRRC28Q86X40 367 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF784Q8NCA9 323 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 FIZ1Q96SL8 496 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 ZNF696Q9H7X3 374 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 BABAM2Q9NXR7 383 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 MDC1Q14676 2089 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 NKX2-5P52952 324 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 OGFOD3Q6PK18 319 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 CREB3L2Q70SY1 520 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 ADGRG5Q8IZF4 528 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 METTL4Q8N3J2 472 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 M0R1B8 84 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 MRPS10P82664 201 aaKnown RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 ACTBL2Q562R1 376 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 MFFQ9GZY8 342 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 HRH4Q9H3N8 390 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 NOX3Q9HBY0 568 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 FAM96BQ9Y3D0 163 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 C4AP0C0L4 1744 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 NRG2O14511 850 aaPredicted RBP10.37□□□□□ -0.75
PTCH1-205ENST00000418258 GPR171O14626 319 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 CRYZL1O95825 349 aa10.37□□□□□ -0.75
PTCH1-205ENST00000418258 IL2RAP01589 272 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms