RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 HPRP00739 348 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 THY1P04216 161 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 DANCRP0C864 163 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 HOXB1P14653 301 aaPredicted RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 RBM34P42696 430 aaKnown RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 SLC7A2P52569 658 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 ZNF74Q16587 644 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 CEACAM16Q2WEN9 425 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 AGAP6Q5VW22 663 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 HACD2Q6Y1H2 254 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 WDR88Q6ZMY6 472 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 TREML1Q86YW5 311 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 OR6N1Q8NGY5 312 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 BCL2L2Q92843 193 aaPredicted RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 BOD1Q96IK1 185 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 LRR1Q96L50 414 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 Q96MF0 132 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 HS6ST2Q96MM7 605 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 OR2M2Q96R28 347 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 DHRS9Q9BPW9 319 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 KCTD14Q9BQ13 255 aaPredicted RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 EMC6Q9BV81 110 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 GPR35Q9HC97 309 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 MOV10Q9HCE1 1003 aaKnown RBP9.81□□□□□ -0.84
RFFL-204ENST00000414419 MED29Q9NX70 200 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 RIMS3Q9UJD0 308 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 ZNF229Q9UJW7 825 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 ATP23Q9Y6H3 246 aa9.81□□□□□ -0.84
RFFL-204ENST00000414419 ZNF99A8MXY4 864 aaPredicted RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 BLOC1S5-TXNDC5H3BN57 136 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 NME4O00746 187 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 GMNNO75496 209 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 LYPD3O95274 346 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ZNF682O95780 498 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 MT-ND1P03886 318 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 IFNW1P05000 195 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 SOD3P08294 240 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 THRBP10828 461 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 PAX1P15863 534 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 DRD4P21917 467 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 PRDX6P30041 224 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 CAPZA2P47755 286 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 FABP6P51161 128 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 GYS2P54840 703 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 BIDP55957 195 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ARF1P84077 181 aaKnown RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 SLC25A3Q00325 362 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ST3GAL3Q11203 375 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 PIN1Q13526 163 aaPredicted RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 CAMK2DQ13557 499 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 PGGHGQ32M88 737 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 FKBP9P1Q75LS8 142 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 SLC35D2Q76EJ3 337 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 LINGO2Q7L985 606 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 NANOGNBQ7Z5D8 188 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 TSPYL5Q86VY4 417 aaPredicted RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 C20orf196Q8IYI0 205 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 TMEM123Q8N131 208 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 FBXL14Q8N1E6 418 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 MAGEE2Q8TD90 523 aaPredicted RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 TMEM255BQ8WV15 326 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 TMEM239Q8WW34 195 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 FAM162AQ96A26 154 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 TXNDC15Q96J42 360 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 C18orf12Q96KH6 178 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ADAD1Q96M93 576 aaKnown RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 PRSS27Q9BQR3 290 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 BDH2Q9BUT1 245 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ZNF426Q9BUY5 554 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 MYLK2Q9H1R3 596 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ZNF701Q9NV72 531 aaPredicted RBP9.8□□□□□ -0.84
RFFL-204ENST00000414419 POFUT2Q9Y2G5 429 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 MED31Q9Y3C7 131 aa9.8□□□□□ -0.84
RFFL-204ENST00000414419 ARPC4-TTLL3A0A0A6YYG9 625 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 E7EQL1 145 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 CRYAAP02489 173 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 BMP4P12644 408 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 IFNGR1P15260 489 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 FUT1P19526 365 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 TTKP33981 857 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 CDKN1AP38936 164 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 CSNK1A1P48729 337 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 GSK3BP49841 420 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 PSME3P61289 254 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 TUBA1BP68363 451 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 TUBA4AP68366 448 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 SPOCK1Q08629 439 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 ZP4Q12836 540 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 IFI44LQ53G44 452 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 TUBA1AQ71U36 451 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 KRTAP1-3Q8IUG1 177 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 NKAIN4Q8IVV8 208 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 CCDC36Q8IYA8 594 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 MUC15Q8N387 334 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 LRRC17Q8N6Y2 441 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 IGFBPL1Q8WX77 278 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 SGTBQ96EQ0 304 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 PRRC1Q96M27 445 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 SLC38A2Q96QD8 506 aa9.79□□□□□ -0.84
RFFL-204ENST00000414419 TRAF4Q9BUZ4 470 aaPredicted RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms