RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 CLOCKO15516 846 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 HNRNPRO43390 633 aaKnown RBP12.3□□□□□ -0.44
CPNE1-206ENST00000412056 FKBP6O75344 327 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 SLC43A1O75387 559 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 UPK3AO75631 287 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 CIB2O75838 187 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 CNOT4O95628 575 aaKnown RBP12.3□□□□□ -0.44
CPNE1-206ENST00000412056 ITGA5P08648 1049 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 PEX19P40855 299 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 BIDP55957 195 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 RPS4XP62701 263 aaKnown RBP12.3□□□□□ -0.44
CPNE1-206ENST00000412056 ITGADQ13349 1161 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 LAPTM4AQ15012 233 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 P2RY6Q15077 328 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 C9orf135Q5VTT2 229 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 C22orf34Q6ZV56 151 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 TMPRSS11FQ6ZWK6 438 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 SLC35D2Q76EJ3 337 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 LINGO2Q7L985 606 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 BHLHA15Q7RTS1 189 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-206ENST00000412056 OAFQ86UD1 273 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 CDK20Q8IZL9 346 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 TMEM123Q8N131 208 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 ZNF433Q8N7K0 673 aaPredicted RBP12.3□□□□□ -0.44
CPNE1-206ENST00000412056 POMGNT2Q8NAT1 580 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 OR51A7Q8NH64 312 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 SLCO4A1Q96BD0 722 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 RSRC1Q96IZ7 334 aaKnown RBP12.3□□□□□ -0.44
CPNE1-206ENST00000412056 WFIKKN1Q96NZ8 548 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 GPA33Q99795 319 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 MCCC2Q9HCC0 563 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 INIPQ9NRY2 104 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 ASB6Q9NWX5 421 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 TMCC3Q9ULS5 477 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 GPR52Q9Y2T5 361 aa12.3□□□□□ -0.44
CPNE1-206ENST00000412056 ANKHD1Q8IWZ3 2542 aaKnown RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 PDLIM1O00151 329 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 KLF4O43474 513 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 OR10H3O60404 316 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 KRT36O76013 467 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 CST1P01037 141 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 IL32P24001 234 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 DNAJA1P31689 397 aaKnown RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 SLC9A3P48764 834 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 HMGA2P52926 109 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 CAMK2DQ13557 499 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 CCNIQ14094 377 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 ZER1Q7Z7L7 766 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 IGFN1Q86VF2 1251 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 ZNF295-AS1Q8N0V1 137 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 LRRC75AQ8NAA5 344 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 PAPD5Q8NDF8 572 aaKnown RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 OR9Q2Q8NGE9 314 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 KISS1RQ969F8 398 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 ZC3HAV1LQ96H79 300 aaKnown RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 TNFRSF13CQ96RJ3 184 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 LINC00470Q9BZP3 86 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 ACTR6Q9GZN1 396 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 REEP1Q9H902 201 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 KRCC1Q9NPI7 259 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 CCM2LQ9NUG4 571 aaPredicted RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 TAS2R16Q9NYV7 291 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 SAMHD1Q9Y3Z3 626 aaKnown RBP12.29□□□□□ -0.44
CPNE1-206ENST00000412056 U3KQV3 271 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 HECTD1Q9ULT8 2610 aa12.29□□□□□ -0.44
CPNE1-206ENST00000412056 COL12A1Q99715 3063 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 A0A1W2PRG6 482 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 UNC119BA6NIH7 251 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 RAD51DO75771 328 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 KRT33AO76009 404 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 BCL10O95999 233 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 ZNF26P17031 533 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-206ENST00000412056 IST1P53990 364 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 TOP3AQ13472 1001 aaPredicted RBP12.28□□□□□ -0.44
CPNE1-206ENST00000412056 ZBED5Q49AG3 693 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 ALG10Q5BKT4 473 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 PGBD2Q6P3X8 592 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 C20orf196Q8IYI0 205 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 STEAP2Q8NFT2 490 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 OR6X1Q8NH79 312 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 FAM222BQ8WU58 562 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 S100PBPQ96BU1 408 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 MED18Q9BUE0 208 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 OR10A4Q9H209 315 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 KCNN3Q9UGI6 736 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 NDRG3Q9UGV2 375 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 SIGLEC7Q9Y286 467 aa12.28□□□□□ -0.44
CPNE1-206ENST00000412056 CIB4A0PJX0 185 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 OR6C65A6NJZ3 312 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 ZNF726A6NNF4 738 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 MCIDASD6RGH6 385 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 ZNF587BE7ETH6 402 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 M0R3G1 203 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 TIPRLO75663 272 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 CCNB2O95067 398 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 THBDP07204 575 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 EPXP11678 715 aa12.27□□□□□ -0.45
CPNE1-206ENST00000412056 HOXB6P17509 224 aaKnown RBP12.27□□□□□ -0.45
CPNE1-206ENST00000412056 MPGP29372 298 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms