RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 LRRC23Q53EV4 343 aaPredicted RBP16.62■□□□□ 0.25
SF3A1-202ENST00000411423 CYBRD1Q53TN4 286 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 HMBOX1Q6NT76 420 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 TTC33Q6PID6 262 aaPredicted RBP16.62■□□□□ 0.25
SF3A1-202ENST00000411423 DEF8Q6ZN54 512 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 SPATA21Q7Z572 469 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 C20orf196Q8IYI0 205 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 OR2T12Q8NG77 320 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 OR5J2Q8NH18 312 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 PFN4Q8NHR9 129 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 RASSF5Q8WWW0 418 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 MYLK2Q9H1R3 596 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 CRLF2Q9HC73 371 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 MGAT4BQ9UQ53 548 aa16.62■□□□□ 0.25
SF3A1-202ENST00000411423 SETD2Q9BYW2 2564 aaPredicted RBP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 ARPC4-TTLL3A0A0A6YYG9 625 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 M0R3G1 203 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 SMAD7O15105 426 aaKnown RBP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 SERPINI2O75830 405 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 MT-ATP6P00846 226 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 CELA3BP08861 270 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 DRD4P21917 467 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 TTKP33981 857 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 LSM11P83369 360 aaKnown RBP eCLIP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 PIN1Q13526 163 aaPredicted RBP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 CAMK2DQ13557 499 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 ANKRD16Q6P6B7 361 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 GPR137CQ8N3F9 429 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 MAGEE2Q8TD90 523 aaPredicted RBP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 TMEM255BQ8WV15 326 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 PROX1Q92786 737 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 GTPBP3Q969Y2 492 aaKnown RBP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 RADILQ96JH8 1075 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 DHRS9Q9BPW9 319 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 CRNNQ9UBG3 495 aaPredicted RBP16.61■□□□□ 0.25
SF3A1-202ENST00000411423 POU2F3Q9UKI9 436 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 MOKQ9UQ07 419 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 ALPK2Q86TB3 2170 aa16.61■□□□□ 0.25
SF3A1-202ENST00000411423 ELOVL7A1L3X0 281 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 CCDC22O60826 627 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 WNT11O96014 354 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 ASAH2BP0C7U1 165 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 ADORA3P0DMS8 318 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 AHCYP23526 432 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 SLC7A2P52569 658 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 LIPEQ05469 1076 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 KLHL24Q6TFL4 600 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 PXKQ7Z7A4 578 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 PIK3C3Q8NEB9 887 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 MPP4Q96JB8 637 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 FKRPQ9H9S5 495 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 NOX3Q9HBY0 568 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 C20orf141Q9NUB4 165 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 RIMS3Q9UJD0 308 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 BAG5Q9UL15 447 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 NOX1Q9Y5S8 564 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 ATP23Q9Y6H3 246 aa16.6■□□□□ 0.25
SF3A1-202ENST00000411423 ANK3Q12955 4377 aaKnown RBP16.6■□□□□ 0.25
SF3A1-202ENST00000411423 IGLV1-44P01699 117 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 CECR9P0C854 216 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 IFNGR1P15260 489 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 HOXB4P17483 251 aaPredicted RBP16.59■□□□□ 0.25
SF3A1-202ENST00000411423 CALCRP30988 508 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 ACVR1BP36896 505 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 ZP4Q12836 540 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 TNK1Q13470 666 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 MELKQ14680 651 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 VTCN1Q7Z7D3 282 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 BIVMQ86UB2 503 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 ANKK1Q8NFD2 765 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 HTRA1Q92743 480 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 TPD52L3Q96J77 140 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 SLC38A2Q96QD8 506 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 GRIP2Q9C0E4 1043 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 FAM107BQ9H098 131 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 OBP2BQ9NPH6 170 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 A4GNTQ9UNA3 340 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 SNX13Q9Y5W8 968 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 ZANQ9Y493 2812 aa16.59■□□□□ 0.25
SF3A1-202ENST00000411423 PIP5K1CO60331 668 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 OR5F1O95221 314 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 LY6G6DO95868 133 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 FUT1P19526 365 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 GSK3BP49841 420 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 FABP6P51161 128 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 SH3BGRP55822 239 aaPredicted RBP16.58■□□□□ 0.24
SF3A1-202ENST00000411423 BIDP55957 195 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 TAS2R41P59536 307 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 UBE2NP61088 152 aaKnown RBP16.58■□□□□ 0.24
SF3A1-202ENST00000411423 SELENOWP63302 87 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 DNM1P46Q6ZS02 220 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 MUC15Q8N387 334 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 LRR1Q96L50 414 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 BDH2Q9BUT1 245 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 CACNG6Q9BXT2 260 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 SLC19A3Q9BZV2 496 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 NANSQ9NR45 359 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 CBLN4Q9NTU7 201 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 ZNF224Q9NZL3 707 aa16.58■□□□□ 0.24
SF3A1-202ENST00000411423 ZNF229Q9UJW7 825 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms