RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SLC43A1O75387 559 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 SERPINI2O75830 405 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 ITGA5P08648 1049 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 TSPAN19P0C672 248 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 CRYGSP22914 178 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 MPGP29372 298 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 TGFBR3Q03167 851 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 FGD3Q5JSP0 725 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 P2RY8Q86VZ1 359 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 ZDHHC21Q8IVQ6 265 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 CDK20Q8IZL9 346 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 TMEM123Q8N131 208 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 CADM1Q9BY67 442 aaKnown RBP17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 TRIM15Q9C019 465 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 MAGIXQ9H6Y5 334 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 MED29Q9NX70 200 aa17.48■□□□□ 0.39
PDLIM2-207ENST00000409417 TRBV4-1A0A0J9YWV2 114 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 CIB4A0PJX0 185 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 SLC35F4A4IF30 521 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF587BE7ETH6 402 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 SAGP10523 405 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 IFNGR1P15260 489 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 MAKP20794 623 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 MAGEA2P43356 314 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 FOXG1P55316 489 aaPredicted RBP17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 RPL18Q07020 188 aaKnown RBP17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 LGALS3BPQ08380 585 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 TAB1Q15750 504 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 OR7E24Q6IFN5 339 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 SLC35D2Q76EJ3 337 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 SSX8Q7RTT4 187 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 TMEM200AQ86VY9 491 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 OR52J3Q8NH60 311 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 MUS81Q96NY9 551 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 FUZQ9BT04 418 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 EMC6Q9BV81 110 aa17.47■□□□□ 0.39
PDLIM2-207ENST00000409417 AKAP6Q13023 2319 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 OR5H1A6NKK0 313 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 ZNF726A6NNF4 738 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 EFCAB9A8MZ26 197 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 UPK3AO75631 287 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 AQP2P41181 271 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 SPIBQ01892 262 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 CHRNB3Q05901 458 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 FAM98BQ52LJ0 330 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 TIMM23BQ5SRD1 257 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 TMPRSS11FQ6ZWK6 438 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 C1orf162Q8NEQ5 155 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 LRR1Q96L50 414 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 ADAD1Q96M93 576 aaKnown RBP17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 ALKBH3Q96Q83 286 aaPredicted RBP17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 TMEM5Q9Y2B1 443 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 HIF3AQ9Y2N7 669 aa17.46■□□□□ 0.39
PDLIM2-207ENST00000409417 AQP12BA6NM10 295 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 DEFB108AA8MXU0 73 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 RPL36A-HNRNPH2H7BZ11 118 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 RAD51DO75771 328 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 KRT36O76013 467 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 GADD45GO95257 159 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 HRGP04196 525 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 SLC9A3P48764 834 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 KRTAP10-9P60411 292 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 RPS4XP62701 263 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 FLOT2Q14254 428 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 LAPTM4AQ15012 233 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 SEC23BQ15437 767 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 GABRA6Q16445 453 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 ANKDD1AQ495B1 522 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 C9orf135Q5VTT2 229 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 MEX3DQ86XN8 651 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 AQP12AQ8IXF9 295 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 C20orf196Q8IYI0 205 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 OR4K5Q8NGD3 323 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 OR6X1Q8NH79 312 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 CLEC4MQ9H2X3 399 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 INIPQ9NRY2 104 aa17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 HRNRQ86YZ3 2850 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-207ENST00000409417 A0A1W2PRG6 482 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 SH3PXD2BA1X283 911 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 SIAH2O43255 324 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 F13BP05160 661 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 GPR4P46093 362 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 BIDP55957 195 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 STK11Q15831 433 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 CARD17Q5XLA6 110 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 HMBOX1Q6NT76 420 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 LINGO2Q7L985 606 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 OAFQ86UD1 273 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 WFDC8Q8IUA0 241 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 GPR137CQ8N3F9 429 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 C17orf78Q8N4C9 275 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 MOSPD2Q8NHP6 518 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 MUCL1Q96DR8 90 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 BOD1Q96IK1 185 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 POLDIP3Q9BY77 421 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 LRMDAQ9H2I8 198 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 MMADHCQ9H3L0 296 aaPredicted RBP17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 SLC7A8Q9UHI5 535 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 POMPQ9Y244 141 aa17.44■□□□□ 0.38
PDLIM2-207ENST00000409417 CDC42EP2O14613 210 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms