RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 SLC35D2Q76EJ3 337 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 PACRGLQ8N7B6 248 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 CLDN22Q8N7P3 220 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 ZIC4Q8N9L1 334 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 OR4Q3Q8NH05 313 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 MBD3L2Q8NHZ7 208 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 POLDIP3Q9BY77 421 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 Q9UFV3 132 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 POFUT2Q9Y2G5 429 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 IER3IP1Q9Y5U9 82 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 CDH10Q9Y6N8 788 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 HIVEP3Q5T1R4 2406 aa12.53□□□□□ -0.4
CHRNA1-204ENST00000409323 H7C1C5 153 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 IL2RAP01589 272 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TSPAN19P0C672 248 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TMIGD3P0DMS9 266 aaPredicted RBP12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 FCGR2AP12318 317 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 OSMP13725 252 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 AGTR1P30556 359 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 PTGER4P35408 488 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 SELENOPP49908 381 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 BIDP55957 195 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 LCN6P62502 163 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 CAMK2DQ13557 499 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 ACKR1Q16570 336 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 RFX4Q33E94 735 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 NIPAL3Q6P499 406 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 CASP12Q6UXS9 341 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 SLC43A2Q8N370 569 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 ADPRHL1Q8NDY3 354 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TEX47Q8TBZ9 253 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 Q96M85 177 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF570Q96NI8 536 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 ERMAPQ96PL5 475 aaPredicted RBP12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TSPAN32Q96QS1 320 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 DMRTA2Q96SC8 542 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TM9SF2Q99805 663 aa12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TACO1Q9BSH4 297 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 ZNF346Q9UL40 294 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 NOSIPQ9Y314 301 aaKnown RBP12.52□□□□□ -0.4
CHRNA1-204ENST00000409323 TEX13CA0A0J9YWL9 993 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 HTR3EA5X5Y0 456 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 E9PLN8 166 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 RCBTB2O95199 551 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 YES1P07947 543 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 KIR2DL2P43627 348 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 PRPS1P60891 318 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 ZP4Q12836 540 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 RNPS1Q15287 305 aaKnown RBP12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 SF3B4Q15427 424 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 IZUMO2Q6UXV1 221 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 CD300LDQ6UXZ3 194 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 PXKQ7Z7A4 578 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 ANKK1Q8NFD2 765 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 OR52L1Q8NGH7 329 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 MBOAT4Q96T53 435 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 VKORC1Q9BQB6 163 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 TOR3AQ9H497 397 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 IL20Q9NYY1 176 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 USE1Q9NZ43 259 aa12.52□□□□□ -0.41
CHRNA1-204ENST00000409323 A0A1W2PRG6 482 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SLC35F4A4IF30 521 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 DLGAP1O14490 977 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SMNDC1O75940 238 aaKnown RBP eCLIP12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SLC2A10O95528 541 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 BCL10O95999 233 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 CD14P08571 375 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 BMP5P22003 454 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SLC6A6P31641 620 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 TIMP3P35625 211 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 ACVR1BP36896 505 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SLC16A1P53985 500 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 CRISP1P54107 249 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 MYBPC1Q00872 1141 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 COX10Q12887 443 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 GINS1Q14691 196 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 TMEM201Q5SNT2 666 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 GTF2IRD2BQ6EKJ0 949 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 ACSM5Q6NUN0 579 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 NHLRC1Q6VVB1 395 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 AAED1Q7RTV5 226 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 BTLAQ7Z6A9 289 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 GTF2IRD2Q86UP8 949 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 LIX1LQ8IVB5 337 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SYT14Q8NB59 555 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 CCDC120Q96HB5 630 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 GMPPAQ96IJ6 420 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 SF3B5Q9BWJ5 86 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 PRSS50Q9UI38 385 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 ORC6Q9Y5N6 252 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 NOX1Q9Y5S8 564 aa12.51□□□□□ -0.41
CHRNA1-204ENST00000409323 IGKV3D-15A0A087WSY6 115 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 BHLHE40O14503 412 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 DENRO43583 198 aaKnown RBP12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 TNFSF13O75888 250 aa12.5□□□□□ -0.41
CHRNA1-204ENST00000409323 VAMP5O95183 116 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms