RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 AIFM1O95831 613 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 FABP1P07148 127 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 GM2AP17900 193 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SLC35A2P78381 396 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 HBMQ6B0K9 141 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 MDGA1Q8NFP4 955 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 NT5DC2Q9H857 520 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 IL17CQ9P0M4 197 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 OR6C65A6NJZ3 312 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SEC14L6B5MCN3 397 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SIGLEC6O43699 453 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PPP3CBP16298 524 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 RAB38P57729 211 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 FLI1Q01543 452 aaPredicted RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM41BQ5BJD5 291 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SYT13Q7L8C5 426 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 FRMD1Q8N878 549 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF732B4DXR9 585 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 FOLR1P15328 257 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 GLYR1Q49A26 553 aaPredicted RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PRAMEF20Q5VT98 475 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PARS2Q7L3T8 475 aaKnown RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ANKLE1Q8NAG6 615 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZFPM2Q8WW38 1151 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 CORO2AQ92828 525 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 OR11A1Q9GZK7 315 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 METTL15P1P0C7V9 234 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 IMPA1P29218 277 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 HYAL4Q2M3T9 481 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 DBX2Q6ZNG2 339 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 GDPD3Q7L5L3 318 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 C15orf54Q8N8G6 183 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 RNF170Q96K19 258 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 COQ3Q9NZJ6 369 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 YLPM1P49750 1951 aaKnown RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 RPS10-NUDT3A0A1W2PQS6 291 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 RFXAPO00287 272 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 APOA2P02652 100 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 RPS10P46783 165 aaKnown RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 KCNJ10P78508 379 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SLC7A9P82251 487 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 YIF1BQ5BJH7 314 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 GAREM2Q75VX8 874 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 CATSPERDQ86XM0 798 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 DUSP19Q8WTR2 217 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF480Q8WV37 535 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 HRASLS5Q96KN8 279 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 BARHL1Q9BZE3 327 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PLCH1Q4KWH8 1693 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 NCR1O76036 304 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 CYBAP13498 195 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 NFYBP25208 207 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PTGER1P34995 402 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 HOXC5Q00444 222 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PRDX1Q06830 199 aaKnown RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF266Q14584 549 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 KCNJ8Q15842 424 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZADH2Q8N4Q0 377 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SCCPDHQ8NBX0 429 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PLPP5Q8NEB5 264 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 OR10J5Q8NHC4 309 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ATOH1Q92858 354 aaPredicted RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ARPC5LQ9BPX5 153 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 PDCD1LG2Q9BQ51 273 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 NUDT9Q9BW91 350 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZCCHC4Q9H5U6 513 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 KIAA1456Q9P272 454 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ADAM29Q9UKF5 820 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 HTR2CP28335 458 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 SNTB1Q13884 538 aaKnown RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 B3GNT8Q7Z7M8 397 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 TIMD4Q96H15 378 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 ZC3HAV1LQ96H79 300 aaKnown RBP11.18□□□□□ -0.62
SMCR8-201ENST00000406438 CA5BQ9Y2D0 317 aa11.18□□□□□ -0.62
SMCR8-201ENST00000406438 RGPD4Q7Z3J3 1758 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 KRBA1A5PL33 1030 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 A6NIN4 97 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 KLRC4-KLRK1H3BQV0 150 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 UTS2O95399 124 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 OR10J4P0C629 311 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 PRKACAP17612 351 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 GMPRP36959 345 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SIRPAP78324 504 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 Q6ZTK2 550 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ALG12Q9BV10 488 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 C1GALT1Q9NS00 363 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM221A6NGB7 291 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 ZNF728P0DKX0 622 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 BLVRBP30043 206 aaPredicted RBP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 PSMB3P49720 205 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SUB1P53999 127 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMCR8-201ENST00000406438 CMPK2Q5EBM0 449 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 MORN1Q5T089 497 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 SLC46A3Q7Z3Q1 461 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 NKAIN3Q8N8D7 197 aa11.17□□□□□ -0.62
SMCR8-201ENST00000406438 TMEM40Q8WWA1 233 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms