RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 AK6Q9Y3D8 172 aaKnown RBP3.73□□□□□ -1.81
HMGB3P18-201ENST00000406327 L3MBTL1Q9Y468 752 aa3.73□□□□□ -1.81
HMGB3P18-201ENST00000406327 TIMM10BQ9Y5J6 103 aa3.73□□□□□ -1.81
HMGB3P18-201ENST00000406327 SSC5DA1L4H1 1573 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 MYH7BA7E2Y1 1941 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 MYH4Q9Y623 1939 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 NOTCH4Q99466 2003 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 IGKV6-21A0A0C4DH24 114 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 LRRIQ4A6NIV6 560 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 TMEM110-MUSTN1A8MSY1 372 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 A8MX80 341 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SGK1O00141 431 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 RS1O15537 224 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 MED7O43513 233 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SPOPO43791 374 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 TIMM8AO60220 97 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SHOX2O60902 331 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 AP2A1O95782 977 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 KRT14P02533 472 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 IVLP07476 585 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 ALOX5P09917 674 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 LAMP1P11279 417 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 CYP2B6P20813 491 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 IDSP22304 550 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 PTBP1P26599 531 aaKnown RBP eCLIP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 HMGCLP35914 325 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC1A1P43005 524 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 ACOT2P49753 483 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SUCLG1P53597 346 aaKnown RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 RWDD2BP57060 319 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 IRX3P78415 501 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 DR1Q01658 176 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 ST3GAL3Q11203 375 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 CUL2Q13617 745 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 DPYSL3Q14195 570 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 FCN2Q15485 313 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLC25A52Q3SY17 297 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 TTMPQ5BVD1 217 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 FAM120AOSQ5T036 256 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 WSCD1Q658N2 575 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 DUPD1Q68J44 220 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR5M10Q6IEU7 315 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 REG3GQ6UW15 175 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 LRRC31Q6UY01 552 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 C9orf40Q8IXQ3 194 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 LINC01561Q8N1V8 128 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 KIR3DL3Q8N743 410 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 POM121L12Q8N7R1 296 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 PRELID2Q8N945 189 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 MFSD9Q8NBP5 474 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR51G2Q8NGK0 314 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 OR2L2Q8NH16 312 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 ZNF564Q8TBZ8 553 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 MAGOHBQ96A72 148 aaKnown RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 RASD2Q96D21 266 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 PKNOX2Q96KN3 472 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 APOL2Q9BQE5 337 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SPATA16Q9BXB7 569 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 GON7Q9BXV9 100 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 SLITRK2Q9H156 845 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 NEUROG2Q9H2A3 272 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 AZI2Q9H6S1 392 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 FANCFQ9NPI8 374 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 ETNK2Q9NVF9 386 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 RBAKQ9NYW8 714 aaPredicted RBP3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 PCYOX1Q9UHG3 505 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 NPTNQ9Y639 398 aa3.72□□□□□ -1.81
HMGB3P18-201ENST00000406327 PTPRJQ12913 1337 aa3.71□□□□□ -1.81
HMGB3P18-201ENST00000406327 NBR2O15453 112 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF264O43296 627 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 FAM189A1O60320 539 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 ERLIN2O94905 339 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 CLTAP09496 248 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 ZNF883P0CG24 379 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PGAM2P15259 253 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 IGHV1-2P23083 117 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 FGF9P31371 208 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 TAGLN2P37802 199 aaKnown RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 COILP38432 576 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 MAP3K8P41279 467 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 MARCKSL1P49006 195 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 VEGFCP49767 419 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC26A2P50443 739 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PLK1P53350 603 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SEC61GP60059 68 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 MRPS11P82912 194 aaKnown RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 OGDHQ02218 1023 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 CD47Q08722 323 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SLC10A7Q0GE19 358 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 LAMTOR4Q0VGL1 99 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 PPIL2Q13356 520 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 C1orf61Q13536 156 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 SERTAD2Q14140 314 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 UAP1Q16222 522 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 KLHL38Q2WGJ6 581 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 TRIM16LQ309B1 348 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 HSDL1Q3SXM5 330 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 TIGITQ495A1 244 aa3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 GLYR1Q49A26 553 aaPredicted RBP3.71□□□□□ -1.82
HMGB3P18-201ENST00000406327 TP53I3Q53FA7 332 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms