RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 APODP05090 189 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 IL12BP29460 328 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 CBX5P45973 191 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 NUP54Q7Z3B4 507 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 TMEM200AQ86VY9 491 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 NANPQ8TBE9 248 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ADAM18Q9Y3Q7 739 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 SHISA3A0PJX4 238 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ERCC1P07992 297 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 KLF9Q13886 244 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 RHEBQ15382 184 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ACOT7LQ6ZUV0 252 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ZNF765Q7L2R6 523 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 DPY19L4Q7Z388 723 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 PTP4A1Q93096 173 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 RASD2Q96D21 266 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ULBP3Q9BZM4 244 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 CHMP1AQ9HD42 196 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 FBXL4Q9UKA2 621 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 HMSDA8MTL9 139 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 SIGLEC6O43699 453 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 PLGP00747 810 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 F13BP05160 661 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 CXCL2P19875 107 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 POU3F2P20265 443 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 HOXC8P31273 242 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 GPR85P60893 370 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 B3GNTL1Q67FW5 361 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 CMIPQ8IY22 773 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ARIH2OSQ8N7S6 290 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 OR7G2Q8NG99 324 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 CD99L2Q8TCZ2 262 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 SLC25A44Q96H78 314 aaPredicted RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 PTDSS2Q9BVG9 487 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 TBL1XR1Q9BZK7 514 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 MAN2C1Q9NTJ4 1040 aa12.84□□□□□ -0.35
HMGA2-204ENST00000403681 ZMAT5Q9UDW3 170 aaKnown RBP12.84□□□□□ -0.35
HMGA2-204ENST00000403681 A0A1B0GV50 99 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 SOX1O00570 391 aaPredicted RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 FBXO24O75426 580 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 ANKRD34CP0C6C1 535 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 CPN1P15169 458 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 HNRNPA1L2Q32P51 320 aaKnown RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 ACBD4Q8NC06 268 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 VN1R2Q8NFZ6 395 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 ELP5Q8TE02 316 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 ELOVL3Q9HB03 270 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 BORCS7-ASMTA0A0B4J1R7 106 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 TMEM212A6NML5 194 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 MED6O75586 246 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 DIO1P49895 249 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 SPOCK1Q08629 439 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 FBXO42Q6P3S6 717 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 STAC2Q6ZMT1 411 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 RHOUQ7L0Q8 258 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 MUC20Q8N307 709 aaPredicted RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 OR5M9Q8NGP3 310 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 NPAS1Q99742 590 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 SULT4A1Q9BR01 284 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 GPR160Q9UJ42 338 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 RGPD3A6NKT7 1758 aaPredicted RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 RGPD4Q7Z3J3 1758 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 A0A1W2PP55 124 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 THBS1P07996 1170 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 OR4E1P0C645 316 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 PPT1P50897 306 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 NTHL1P78549 312 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 MLC1Q15049 377 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 TRMT12Q53H54 448 aaKnown RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 EOGTQ5NDL2 527 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 DNM1P34Q6PK57 102 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 TMEFF1Q8IYR6 380 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 GIMAP5Q96F15 307 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 AHCYL2Q96HN2 611 aaKnown RBP12.83□□□□□ -0.36
HMGA2-204ENST00000403681 FOXN4Q96NZ1 517 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 C20orf141Q9NUB4 165 aa12.83□□□□□ -0.36
HMGA2-204ENST00000403681 SLC22A23A1A5C7 686 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 RFPL4AA6NLU0 287 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 WASH3PC4AMC7 463 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 RFPL4AL1F8VTS6 287 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 H7C1C5 153 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 GSTZ1O43708 216 aaPredicted RBP12.82□□□□□ -0.36
HMGA2-204ENST00000403681 KCNJ13O60928 360 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 KAT7O95251 611 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 HCKP08631 526 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 SPI1P17947 270 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 LCN6P62502 163 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 LPCAT3Q6P1A2 487 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 FIGLAQ6QHK4 219 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 SLC39A11Q8N1S5 342 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 PNPLA2Q96AD5 504 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 ARRDC3Q96B67 414 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 Q96M85 177 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 CDC6Q99741 560 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 OR52A5Q9H2C5 316 aa12.82□□□□□ -0.36
HMGA2-204ENST00000403681 SMCO4Q9NRQ5 59 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms