RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 NIPAL2Q9H841 368 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 PLGRKTQ9HBL7 147 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 SLC2A8Q9NY64 477 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 CALYQ9NYX4 217 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 SPATA7Q9P0W8 599 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 IKZF2Q9UKS7 526 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 CELA1Q9UNI1 258 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 NEUROG3Q9Y4Z2 214 aa2.67□□□□□ -1.98
HMGB1P17-201ENST00000403495 KANK1Q14678 1352 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 A0A0U1RQS6 177 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 GJE1A6NN92 205 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 KLLNB2CW77 178 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 LSM1O15116 133 aaKnown RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 INSP01308 110 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 ALDOBP05062 364 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 DUX4L4P0CJ87 422 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 ICAM2P13598 275 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 PEX19P40855 299 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 ATP5OP48047 213 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 ATP5IP56385 69 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 NUP107P57740 925 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 KCNJ2P63252 427 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 GBE1Q04446 702 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 SRSF5Q13243 272 aaKnown RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 KIAA0087Q14695 138 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 GNMTQ14749 295 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 SSX2Q16385 188 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 MRPL23Q16540 153 aaKnown RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 TMEM107Q6UX40 140 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 TRPV1Q8NER1 839 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 OR2G2Q8NGZ5 317 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 RAB3IL1Q8TBN0 382 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 KIFAP3Q92845 792 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 RASD2Q96D21 266 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 SORT1Q99523 831 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 PLIN2Q99541 437 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 KRTAP4-4Q9BYR3 166 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 PKIBQ9C010 78 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 SRMSQ9H3Y6 488 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 CLMPQ9H6B4 373 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 CCL28Q9NRJ3 127 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 PSMC3IPQ9P2W1 217 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 PRG3Q9Y2Y8 225 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 CAB39Q9Y376 341 aaPredicted RBP2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 TMED5Q9Y3A6 229 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 SLC25A15Q9Y619 301 aa2.66□□□□□ -1.98
HMGB1P17-201ENST00000403495 ZNF646O15015 1829 aaPredicted RBP2.65□□□□□ -1.98
HMGB1P17-201ENST00000403495 TDRD6O60522 2096 aaKnown RBP2.65□□□□□ -1.98
HMGB1P17-201ENST00000403495 IGKV1D-13A0A0B4J2D9 117 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCL21O00585 134 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 BBOX1O75936 387 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 ERLIN2O94905 339 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 IGLV1-47P01700 117 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 IGHV2-5P01817 119 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 FGGP02679 453 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 DNAH10OSP0CZ25 163 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 IGKV1-13P0DP09 117 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF17P17021 662 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 TNNI1P19237 187 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 TBPP20226 339 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 CNR1P21554 472 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 FDFT1P37268 417 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 SSR1P43307 286 aaKnown RBP2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 GPNMBQ14956 572 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 CYTH1Q15438 398 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 ARMC12Q5T9G4 340 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 RSBN1Q5VWQ0 802 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 KRTAP11-1Q8IUC1 163 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 BBS5Q8N3I7 341 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZADH2Q8N4Q0 377 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 ZNF557Q8N988 423 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 ACOT11Q8WXI4 607 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 TMEM158Q8WZ71 300 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 FGF14Q92915 247 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 MYDGFQ969H8 173 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 PANX1Q96RD7 426 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 CENPKQ9BS16 269 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 FAM192AQ9GZU8 254 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 SLCO1B3Q9NPD5 702 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 STARD10Q9Y365 291 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 CDHR2Q9BYE9 1310 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 SYNRGQ9UMZ2 1314 aa2.65□□□□□ -1.99
HMGB1P17-201ENST00000403495 MSH6P52701 1360 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 SMCO2A6NFE2 343 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 KRTAP4-16G5E9R7 235 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 DLGAP1O14490 977 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 EIF3HO15372 352 aaKnown RBP eCLIP2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 TSPAN13O95857 204 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 NDUFB10O96000 172 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 ANXA5P08758 320 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 MCF2P10911 925 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 CCNE1P24864 410 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 CRYBB2P43320 205 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 NPBWR2P48146 333 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 KRTAP10-3P60369 221 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 IDI1Q13907 227 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 FZD2Q14332 565 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 PSG5Q15238 335 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 RCN1Q15293 331 aa2.64□□□□□ -1.99
HMGB1P17-201ENST00000403495 XKR7Q5GH72 579 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms