RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 GIN1Q9NXP7 522 aa4.58□□□□□ -1.68
CEP290-202ENST00000397838 RSPH14Q9UHP6 348 aa4.58□□□□□ -1.68
CEP290-202ENST00000397838 IGHV3OR16-10A0A075B7F0 116 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 PSMD11O00231 422 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 SNAI1O95863 264 aaPredicted RBP4.57□□□□□ -1.68
CEP290-202ENST00000397838 IL12AP29459 219 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 RORAP35398 523 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 SLC1A1P43005 524 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 CXCL6P80162 114 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 LCN2P80188 198 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ACVR1Q04771 509 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 FCHO2Q0JRZ9 810 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 TSC22D1Q15714 1073 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 QRICH1Q2TAL8 776 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 Q6ZN92 141 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 IQCKQ8N0W5 287 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 AGAP11Q8TF27 550 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ASZ1Q8WWH4 475 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 MED8Q96G25 268 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 XPO6Q96QU8 1125 aaKnown RBP4.57□□□□□ -1.68
CEP290-202ENST00000397838 NAA50Q9GZZ1 169 aaKnown RBP4.57□□□□□ -1.68
CEP290-202ENST00000397838 ACP6Q9NPH0 428 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 KBTBD11O94819 623 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 PLEKP08567 350 aaPredicted RBP4.57□□□□□ -1.68
CEP290-202ENST00000397838 ACSM4P0C7M7 580 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ANOS1P23352 680 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ERVK-25P63136 954 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 SAMD4BQ5PRF9 694 aaKnown RBP4.57□□□□□ -1.68
CEP290-202ENST00000397838 MRPL21Q7Z2W9 205 aaKnown RBP4.57□□□□□ -1.68
CEP290-202ENST00000397838 HIPK1Q86Z02 1210 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 FTMTQ8N4E7 242 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 OR5T3Q8NGG3 340 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 SPATA3Q8NHX4 192 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ZNF502Q8TBZ5 544 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ATP6V1G3Q96LB4 118 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 LRRK1Q38SD2 2015 aa4.57□□□□□ -1.68
CEP290-202ENST00000397838 ZNF879B4DU55 563 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 LALBAP00709 142 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 SERPINA5P05154 406 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 NR2C1P13056 603 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 FOLR1P15328 257 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 CTRB1P17538 263 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 MAGEA9P43362 315 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 CX3CR1P49238 355 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 MRPL19P49406 292 aaKnown RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 ATP6V0D1P61421 351 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 YWHAGP61981 247 aaKnown RBP eCLIP4.56□□□□□ -1.68
CEP290-202ENST00000397838 PAX8Q06710 450 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 RCAN2Q14206 197 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 KLF17Q5JT82 389 aaPredicted RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 CTRB2Q6GPI1 263 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 GPRIN3Q6ZVF9 776 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 C17orf82Q86X59 251 aaPredicted RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 NRMQ8IXM6 262 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 TRAM1L1Q8N609 369 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 APH1AQ96BI3 265 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 ECHDC3Q96DC8 303 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 SEC22AQ96IW7 307 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 FOLH1BQ9HBA9 442 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 RBMX2Q9Y388 322 aaKnown RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 SLC9A3R1O14745 358 aaPredicted RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 EIF2S2P20042 333 aaKnown RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 CD9P21926 228 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 SLC26A2P50443 739 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 RPL32P62910 135 aaKnown RBP4.56□□□□□ -1.68
CEP290-202ENST00000397838 GGTLC2Q14390 218 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 FAM83EQ2M2I3 478 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 PARP15Q460N3 678 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 XKR4Q5GH76 650 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 GPR107Q5VW38 600 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 ZNF546Q86UE3 836 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 LHFPL3Q86UP9 236 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 PRELID2Q8N945 189 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 BEST4Q8NFU0 473 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 OR2G2Q8NGZ5 317 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 NUBPLQ8TB37 319 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 VSIG2Q96IQ7 327 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 TSSK3Q96PN8 268 aa4.56□□□□□ -1.68
CEP290-202ENST00000397838 IGHV1OR21-1A0A087WYE8 117 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 M0R3G1 203 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 POLR3GO15318 223 aaPredicted RBP4.55□□□□□ -1.68
CEP290-202ENST00000397838 NMT2O60551 498 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 KLK3P07288 261 aaPredicted RBP4.55□□□□□ -1.68
CEP290-202ENST00000397838 RHOXF2BP0C7M4 288 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 PMCHP20382 165 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 GABRR2P28476 465 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 KIR2DS2P43631 304 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 PSMD4P55036 377 aaKnown RBP4.55□□□□□ -1.68
CEP290-202ENST00000397838 CCDC173Q0VFZ6 552 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 AANATQ16613 207 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 GPR157Q5UAW9 335 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 TTC23LQ6PF05 361 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 EID2Q8N6I1 236 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 ZNF557Q8N988 423 aaPredicted RBP4.55□□□□□ -1.68
CEP290-202ENST00000397838 CSNK1G2-AS1Q8NCQ2 148 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 GTSF1Q8WW33 167 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 ITCHQ96J02 903 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 COL21A1Q96P44 957 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 RHOXF2Q9BQY4 288 aa4.55□□□□□ -1.68
CEP290-202ENST00000397838 ACTR3CQ9C0K3 210 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms