RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 RNF13O43567 381 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 TFPIP10646 304 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 SPI1P17947 270 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 TTKP33981 857 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 PAQR6Q6TCH4 344 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 B3GLCTQ6Y288 498 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 PXKQ7Z7A4 578 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 FAM98AQ8NCA5 519 aaKnown RBP11.39□□□□□ -0.59
TRIM39-204ENST00000396548 OR4F15Q8NGB8 312 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 ASB6Q9NWX5 421 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 DMXL2Q8TDJ6 3036 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 A0A0J9YW62 118 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 SLC22A31A6NKX4 558 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 AQP7P3A6NL99 342 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 LIMS3P0CW19 117 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 LIMS4P0CW20 117 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 KRR1Q13601 381 aaKnown RBP11.39□□□□□ -0.59
TRIM39-204ENST00000396548 SLC35D3Q5M8T2 416 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 LEG1Q6P5S2 330 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 OR9Q1Q8NGQ5 310 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 ASB10Q8WXI3 467 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 COG8Q96MW5 612 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 OR5M11Q96RB7 305 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 NDEL1Q9GZM8 345 aa11.39□□□□□ -0.59
TRIM39-204ENST00000396548 KLK10O43240 276 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 GYPBP06028 91 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 CELA3AP09093 270 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 PAICSP22234 425 aaKnown RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 SFTPDP35247 375 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 MEOX1P50221 254 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 RUNX1T1Q06455 604 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 WIPI1Q5MNZ9 446 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 SLC16A12Q6ZSM3 486 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 SHFQ7M4L6 423 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 ZBTB46Q86UZ6 589 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 KDM8Q8N371 416 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 TSPAN10Q9H1Z9 355 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 KLHL13Q9P2N7 655 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF701M0R085 212 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 DCTN6O00399 190 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 RAMP1O60894 148 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 APOL3O95236 402 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 GDF1P27539 372 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 SLC35A1P78382 337 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 TLE3Q04726 772 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 C19orf48Q6RUI8 117 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 CCDC81Q6ZN84 652 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF367Q7RTV3 350 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 GALNTL5Q7Z4T8 443 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 TMEM251Q8N6I4 163 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 PROKR2Q8NFJ6 384 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 OR14L1PQ8NHC6 308 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 RORBQ92753 470 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 NAA50Q9GZZ1 169 aaKnown RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 VCX3AQ9NNX9 186 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 H2AFY2Q9P0M6 372 aaPredicted RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 TMEM129A0AVI4 362 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 M0R3G1 203 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 CD97P48960 835 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 SUCLG1P53597 346 aaKnown RBP11.38□□□□□ -0.59
TRIM39-204ENST00000396548 CLDN20P56880 219 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF766Q5HY98 468 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 ADCK1Q86TW2 530 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 OR6V1Q8N148 313 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 SRXN1Q9BYN0 137 aa11.38□□□□□ -0.59
TRIM39-204ENST00000396548 H0YC42 278 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 KLRC4-KLRK1H3BQV0 150 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 PLGP00747 810 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-204ENST00000396548 SBK2P0C263 348 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 CD46P15529 392 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 AHCYP23526 432 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 AGFG1P52594 562 aaKnown RBP11.37□□□□□ -0.59
TRIM39-204ENST00000396548 OR2B6P58173 313 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 HSF1Q00613 529 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 EEF1A1P5Q5VTE0 462 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 KLHL15Q96M94 604 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 OR51V1Q9H2C8 321 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 MARCH7Q9H992 704 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 ERVK13-1Q9NX77 482 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 QPCTLQ9NXS2 382 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 EXOSC1Q9Y3B2 195 aaKnown RBP11.37□□□□□ -0.59
TRIM39-204ENST00000396548 PRSS37A4D1T9 235 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 LINC01387J3KSC0 135 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 DNPH1O43598 174 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 TRAF3IP2O43734 574 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-204ENST00000396548 GLCEO94923 617 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 ACVR1BP36896 505 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 LIPAP38571 399 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 CD79BP40259 229 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 RFC3P40938 356 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 MAGEA5P43359 124 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 ARG2P78540 354 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 CNPY1Q3B7I2 92 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 RNFT1Q5M7Z0 435 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 IGFL3Q6UXB1 125 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 JAZF1Q86VZ6 243 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 ZNF420Q8TAQ5 688 aaPredicted RBP11.37□□□□□ -0.59
TRIM39-204ENST00000396548 ISOC1Q96CN7 298 aa11.37□□□□□ -0.59
TRIM39-204ENST00000396548 TXNDC15Q96J42 360 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms