RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SAGE2PA6NJ88 616 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 SMIM23A6NLE4 172 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 PGRMC1O00264 195 aaKnown RBP4.22□□□□□ -1.73
GABPB1-204ENST00000396464 PLPP1O14494 284 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 HSD17B6O14756 317 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 PPP1R2P9O14990 202 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 SGCEO43556 437 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CXCL13O43927 109 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CLDN14O95500 239 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 GIMD1P0DJR0 217 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 G0S2P27469 103 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 GTF2H1P32780 548 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 MAS1LP35410 378 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 SAA4P35542 130 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 COILP38432 576 aaPredicted RBP4.22□□□□□ -1.73
GABPB1-204ENST00000396464 VHLP40337 213 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 KIR3DL2P43630 455 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 PRLHRP49683 370 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 EMDP50402 254 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF33BQ06732 778 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF155Q12901 538 aaPredicted RBP4.22□□□□□ -1.73
GABPB1-204ENST00000396464 UPP1Q16831 310 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 IMPG1Q17R60 797 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 FAM106AQ4KMX7 169 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 PIGGQ5H8A4 983 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 SEL1L2Q5TEA6 688 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF626Q68DY1 528 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 FAHD1Q6P587 224 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ADAMTSL5Q6ZMM2 481 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 Q6ZTK2 550 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 C9orf139Q6ZV77 190 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 AHSA2Q719I0 299 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 TIPARPQ7Z3E1 657 aaKnown RBP4.22□□□□□ -1.73
GABPB1-204ENST00000396464 OR4N5Q8IXE1 308 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CCDC112Q8NEF3 446 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 OR5B3Q8NH48 314 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 TEX47Q8TBZ9 253 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 RNF133Q8WVZ7 376 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 TOMM40LQ969M1 308 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 NSL1Q96IY1 281 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 C17orf77Q96MU5 243 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 MICU1Q9BPX6 476 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CCDC28BQ9BUN5 200 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ZYG11BQ9C0D3 744 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CSTL1Q9H114 145 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 TUBB1Q9H4B7 451 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ACP6Q9NPH0 428 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 C8orf4Q9NR00 106 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ABCB10Q9NRK6 738 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 C1orf109Q9NX04 203 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 GMPPBQ9Y5P6 360 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 METP08581 1390 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 GAPVD1Q14C86 1478 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CTTNBP2Q8WZ74 1663 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 CHD1O14646 1710 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ABCA10Q8WWZ4 1543 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 EEA1Q15075 1411 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF521Q96K83 1311 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 SNAPC4Q5SXM2 1469 aa4.22□□□□□ -1.73
GABPB1-204ENST00000396464 ANKRD30AQ9BXX3 1397 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 TVP23AA6NH52 213 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 NKX6-3A6NJ46 265 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 H3BNX3 289 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 TOM1O60784 492 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 LYPLA2O95372 231 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 HPP00738 406 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 CRYABP02511 175 aaKnown RBP4.21□□□□□ -1.73
GABPB1-204ENST00000396464 IL6P05231 212 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 HLA-DOBP13765 273 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 HOXD3P31249 432 aaPredicted RBP4.21□□□□□ -1.73
GABPB1-204ENST00000396464 CAPZBP47756 277 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 PLK1P53350 603 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 ABCE1P61221 599 aaKnown RBP4.21□□□□□ -1.73
GABPB1-204ENST00000396464 VLDLRP98155 873 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 CAPRIN1Q14444 709 aaKnown RBP4.21□□□□□ -1.73
GABPB1-204ENST00000396464 MAD2L1BPQ15013 274 aaPredicted RBP4.21□□□□□ -1.73
GABPB1-204ENST00000396464 DGUOKQ16854 277 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 TRIM16LQ309B1 348 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 COX19Q49B96 90 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 EIPR1Q53HC9 387 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 UNC50Q53HI1 259 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 OR5M10Q6IEU7 315 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 PIGZQ86VD9 579 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 ZFAND4Q86XD8 727 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 FBXL14Q8N1E6 418 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF843Q8N446 348 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 KIF2BQ8N4N8 673 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 KBTBD8Q8NFY9 601 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 ZPLD1Q8TCW7 415 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 TBCKQ8TEA7 893 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 OR5B2Q96R09 309 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 TAAR1Q96RJ0 339 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 ZNF670Q9BS34 389 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 SLC35A5Q9BS91 424 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 Q9HAA7 133 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 FZD3Q9NPG1 666 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 PLEKHJ1Q9NW61 149 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 TAS2R9Q9NYW1 312 aa4.21□□□□□ -1.73
GABPB1-204ENST00000396464 RAB23Q9ULC3 237 aa4.21□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms