RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 NR2C2APQ86WQ0 139 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 DTWD2Q8NBA8 298 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 RPS4Y2Q8TD47 263 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 TTYH2Q9BSA4 534 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 SYT4Q9H2B2 425 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 SRA1Q9HD15 236 aaKnown RBP13.52□□□□□ -0.25
CBX3-202ENST00000396386 MRPL39Q9NYK5 338 aaKnown RBP13.52□□□□□ -0.25
CBX3-202ENST00000396386 MYOTQ9UBF9 498 aa13.52□□□□□ -0.25
CBX3-202ENST00000396386 C2orf72A6NCS6 295 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 C9J4A7 227 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 DCTN6O00399 190 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 GATBO75879 557 aaKnown RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 ARL6IP5O75915 188 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 DXOO77932 396 aaKnown RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 KLK3P07288 261 aaPredicted RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 ZNF28P17035 718 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 PSMB10P40306 273 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 APOBEC1P41238 236 aaKnown RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 DLX5P56178 289 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 RPL27P61353 136 aaKnown RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 ZNF684Q5T5D7 378 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 FAM69BQ5VUD6 431 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 SFXN4Q6P4A7 337 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 FAM198BQ6UWH4 519 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 CCBE1Q6UXH8 406 aaPredicted RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 CDC20BQ86Y33 519 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 PM20D2Q8IYS1 436 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 OR6V1Q8N148 313 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 TMEM105Q8N8V8 129 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 ZNF519Q8TB69 540 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 HAVCR2Q8TDQ0 301 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 PMEPA1Q969W9 287 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 PPP4R1LQ9P1A2 415 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 PCDHGB2Q9Y5G2 931 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 LAMA1P25391 3075 aa13.51□□□□□ -0.25
CBX3-202ENST00000396386 COL27A1Q8IZC6 1860 aaPredicted RBP13.51□□□□□ -0.25
CBX3-202ENST00000396386 TRAV1-2A0A0B4J238 106 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 TVP23AA6NH52 213 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 PLPP3O14495 311 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 GDF9O60383 454 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 PLGP00747 810 aaPredicted RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 CSF3P09919 207 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 AHCYP23526 432 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 CD97P48960 835 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 EVX1P49640 407 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MC2RQ01718 297 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 FOXF1Q12946 379 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MRPL28Q13084 256 aaKnown RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 ACKR1Q16570 336 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 LYPD8Q6UX82 237 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 KCTD20Q7Z5Y7 419 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 OR6N2Q8NGY6 317 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 ZNF417Q8TAU3 575 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MR1Q95460 341 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 ADAD1Q96M93 576 aaKnown RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 KLHL15Q96M94 604 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 ZNF587Q96SQ5 575 aaPredicted RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 INTS14Q96SY0 518 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 DEFB126Q9BYW3 111 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 TXNIPQ9H3M7 391 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 CCDC86Q9H6F5 360 aaKnown RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 METTL7AQ9H8H3 244 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 WDR76Q9H967 626 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 AKIRIN1Q9H9L7 192 aaPredicted RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 SDHAF3Q9NRP4 125 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MED11Q9P086 117 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 KLHDC2Q9Y2U9 406 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 TECTAO75443 2155 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 WDFY4Q6ZS81 3184 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 LOC102723996A0A087X1L8 192 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 A0A0G2JK05 382 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 PRR32B1ATL7 298 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 FAM25AB3EWG3 89 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 FAM25CB3EWG5 89 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 FAM25GB3EWG6 89 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 OR2J2O76002 312 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 TACSTD2P09758 323 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 UCHL1P09936 223 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 FBXO45P0C2W1 286 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 OR8G3PP0DMU2 310 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 RAB3BP20337 219 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MSX1P28360 303 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 ZNF41P51814 821 aaPredicted RBP13.5□□□□□ -0.25
CBX3-202ENST00000396386 OR10A3P58181 314 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 ASAH1Q13510 395 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 IL18Q14116 193 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MFSD13AQ14CX5 517 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 PCOLCEQ15113 449 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 BICRALQ6AI39 1079 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 TRILQ7L0X0 811 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 EGFL6Q8IUX8 553 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 SOSTQ9BQB4 213 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 MALT1Q9UDY8 824 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 LAMP5Q9UJQ1 280 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 VDAC3Q9Y277 283 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 FKBP7Q9Y680 259 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 TMEM14AQ9Y6G1 99 aa13.5□□□□□ -0.25
CBX3-202ENST00000396386 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 PRSS37A4D1T9 235 aa13.49□□□□□ -0.25
CBX3-202ENST00000396386 B4DXG7 233 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms