RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 C7orf77A4D0Y5 90 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HIDE1A8MVS5 230 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NPIPA2E9PIF3 369 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NPIPA5E9PKD4 350 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NPIPA3F8WFD2 350 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 IMPA2O14732 288 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 GEMIN2O14893 280 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 WNT9AO14904 365 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NPC1O15118 1278 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 STK16O75716 305 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 IGHV2-70P01814 119 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HIST1H2ABP04908 130 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 OR8U9P0C7N5 309 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HOXB6P17509 224 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 DCTDP32321 178 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 SGSHP51688 502 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HNRNPKP61978 463 aaKnown RBP eCLIP7.78□□□□□ -1.161e-6■□□□□ 10.4
NDE1-202ENST00000396355 RPS24P62847 133 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 SLBPQ14493 270 aaKnown RBP eCLIP7.78□□□□□ -1.16
NDE1-202ENST00000396355 GUK1Q16774 197 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ZNF528Q3MIS6 628 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ARSJQ5FYB0 599 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 FAM69AQ5T7M9 428 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 PSAPL1Q6NUJ1 521 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 SFXN4Q6P4A7 337 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ENPP7Q6UWV6 458 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HIST3H2AQ7L7L0 130 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ERASQ7Z444 233 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 TMPRSS12Q86WS5 348 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 OR5M3Q8NGP4 307 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 OR6K6Q8NGW6 343 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 MITD1Q8WV92 249 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HIST1H2ACQ93077 130 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 HEXA-AS1Q9H8Q6 139 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 CNOT2Q9NZN8 540 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 FOXJ2Q9P0K8 574 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 DKKL1Q9UK85 242 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NPIPA1Q9UND3 350 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 NEUROG3Q9Y4Z2 214 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 RNF215Q9Y6U7 377 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 EPG5Q9HCE0 2579 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 A0A0U1RQK1 487 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 TSPAN11A1L157 253 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 OR5H14A6NHG9 310 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 DUXAA6NLW8 204 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 SLC33A1O00400 549 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 SCDO00767 359 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 MAOAP21397 527 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 GALNSP34059 522 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 LTBRP36941 435 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ACAA2P42765 397 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 TFPI2P48307 235 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ST8SIA6P61647 398 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ILKQ13418 452 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 SLC10A1Q14973 349 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 TEAD2Q15562 447 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ZNF239Q16600 458 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 ELFN2Q5R3F8 820 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ATPAF1Q5TC12 328 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 ZNF660Q6AZW8 331 aaPredicted RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 LANCL3Q6ZV70 420 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 UBALD2Q8IYN6 164 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 RNF113BQ8IZP6 322 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 NECAP1Q8NC96 275 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 SLC25A28Q96A46 364 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ZNF382Q96SR6 550 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 SLC35A5Q9BS91 424 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 LAT2Q9GZY6 243 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 RAB33BQ9H082 229 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 KCNH6Q9H252 994 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 ZMAT3Q9HA38 289 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 ASCL3Q9NQ33 180 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 GKN1Q9NS71 199 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 LSM7Q9UK45 103 aaKnown RBP7.78□□□□□ -1.16
NDE1-202ENST00000396355 CHST2Q9Y4C5 530 aa7.78□□□□□ -1.16
NDE1-202ENST00000396355 CHD7Q9P2D1 2997 aa7.77□□□□□ -1.16
NDE1-202ENST00000396355 MARCH11A6NNE9 402 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 MPTX1A8MV57 137 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 NDUFS8O00217 210 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 LILRB3O75022 631 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 ITGA10O75578 1167 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 FGF1P05230 155 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 NPSP0C0P6 89 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 BPIP17213 487 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 HOXA9P31269 272 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 RNF144AP50876 292 aaPredicted RBP7.77□□□□□ -1.17
NDE1-202ENST00000396355 HSPB3Q12988 150 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 HABP2Q14520 560 aaPredicted RBP7.77□□□□□ -1.17
NDE1-202ENST00000396355 LINC00303Q3SY05 128 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 ACSM3Q53FZ2 586 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 XKR7Q5GH72 579 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 TMPRSS11BQ86T26 416 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 CLDN19Q8N6F1 224 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 PNLDC1Q8NA58 520 aaKnown RBP7.77□□□□□ -1.17
NDE1-202ENST00000396355 SLC30A7Q8NEW0 376 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 ADIPOR1Q96A54 375 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 ASB16Q96NS5 453 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 GPR62Q9BZJ7 368 aa7.77□□□□□ -1.17
NDE1-202ENST00000396355 CIPCQ9C0C6 399 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms