RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 DPP4P27487 766 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 RAD52P43351 418 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 CT45A2Q5DJT8 189 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 ELFN2Q5R3F8 820 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 APOOLQ6UXV4 268 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 ELSPBP1Q96BH3 223 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 KLHL15Q96M94 604 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 ALG12Q9BV10 488 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 PRDM9Q9NQV7 894 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 POLE3Q9NRF9 147 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 TVP23AA6NH52 213 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 GABARAPH6UMI1 98 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 TSPAN9O75954 239 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 GPANK1O95872 356 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 TPMTP51580 245 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 AP3S2P59780 193 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 LINC01590Q5TEZ4 76 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 TMEM81Q6P7N7 255 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 UNQ9370/PRO34162Q6UXP9 181 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 OR6V1Q8N148 313 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 OR8K3Q8NH51 312 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 C16orf52Q8NHV5 167 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 SYNPRQ8TBG9 265 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 C3orf49Q96BT1 292 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 NKX3-1Q99801 234 aaPredicted RBP18.81■□□□□ 0.6
CLK3-202ENST00000395066 SEMA4CQ9C0C4 833 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 SRA1Q9HD15 236 aaKnown RBP18.81■□□□□ 0.6
CLK3-202ENST00000395066 CA10Q9NS85 328 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 KLHL9Q9P2J3 617 aa18.81■□□□□ 0.6
CLK3-202ENST00000395066 IGKV1D-42A0A075B6H8 117 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 KHDRBS3O75525 346 aaKnown RBP18.8■□□□□ 0.6
CLK3-202ENST00000395066 RGS11O94810 467 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 HOXC4P09017 264 aaPredicted RBP18.8■□□□□ 0.6
CLK3-202ENST00000395066 DCTDP32321 178 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 GLDNQ6ZMI3 551 aaPredicted RBP18.8■□□□□ 0.6
CLK3-202ENST00000395066 DPY19L2P2Q6ZN68 376 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 SPICQ8N5J4 248 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 HOXB13Q92826 284 aaPredicted RBP18.8■□□□□ 0.6
CLK3-202ENST00000395066 ING1Q9UK53 422 aaPredicted RBP18.8■□□□□ 0.6
CLK3-202ENST00000395066 MFSD2BA6NFX1 497 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 LGALS3BPQ08380 585 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 KCNAB1Q14722 419 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 ZNF550Q7Z398 422 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 BCORP1Q8N888 145 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 AIFM2Q9BRQ8 373 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 NOX3Q9HBY0 568 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 ZNF69Q9UC07 566 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 OR5V1Q9UGF6 321 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 ZNF281Q9Y2X9 895 aa18.8■□□□□ 0.6
CLK3-202ENST00000395066 C17orf51A8MQB3 221 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 NPIPB9F8W1W9 429 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 AIPO00170 330 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 KRT33AO76009 404 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 GIPP09681 153 aaPredicted RBP18.79■□□□□ 0.6
CLK3-202ENST00000395066 CTHP32929 405 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 PTH2RP49190 550 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 CD226Q15762 336 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 FAM122CQ6P4D5 195 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 CBLN3Q6UW01 205 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 MEIOBQ8N635 442 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 OR10AC1Q8NH08 325 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 SLCO1B1Q9Y6L6 691 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 CPN1P15169 458 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 ADRA2CP18825 462 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 ANXA7P20073 488 aaKnown RBP18.79■□□□□ 0.6
CLK3-202ENST00000395066 GPR143P51810 404 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 BTN1A1Q13410 526 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 ZNF141Q15928 474 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 TAF8Q7Z7C8 310 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 ZBTB44Q8NCP5 570 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 NMNAT2Q9BZQ4 307 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 Q9N2J8 555 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 ZNF337Q9Y3M9 751 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 SESN1Q9Y6P5 492 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 V9GY05 133 aa18.79■□□□□ 0.6
CLK3-202ENST00000395066 SERINC4A6NH21 518 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 H0YC42 278 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 IFNGR1P15260 489 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 EN2P19622 333 aaPredicted RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 NFYAP23511 347 aaPredicted RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 CDK2P24941 298 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 NUP62P37198 522 aaPredicted RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 PSMA6P60900 246 aaKnown RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 UBE2IP63279 158 aaKnown RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 HTR4Q13639 388 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 GAS6Q14393 721 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 C1orf216Q8TAB5 229 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 FCAMRQ8WWV6 532 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 ULBP3Q9BZM4 244 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 RXFP3Q9NSD7 469 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 RAP2BP61225 183 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 TUSC1Q2TAM9 212 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 TMEM69Q5SWH9 247 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 PWWP2BQ6NUJ5 590 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 OR51A4Q8NGJ6 313 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 CXorf58Q96LI9 332 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 ZNF578Q96N58 590 aaPredicted RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 FOXN4Q96NZ1 517 aa18.78■□□□□ 0.6
CLK3-202ENST00000395066 ELF4Q99607 663 aaPredicted RBP18.78■□□□□ 0.6
CLK3-202ENST00000395066 MAS1P04201 325 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms