RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 CHMP1BQ7LBR1 199 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 RAB40AQ8WXH6 277 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 HAVCR1Q96D42 359 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 WDR89Q96FK6 387 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 VSTM2LQ96N03 204 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ALG12Q9BV10 488 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 FOXQ1Q9C009 403 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 TAS2R10Q9NYW0 307 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 TAS2R5Q9NYW4 299 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 COQ3Q9NZJ6 369 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF69Q9UC07 566 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF337Q9Y3M9 751 aa16.73■□□□□ 0.27
PCDHA1-202ENST00000394633 TGFBR3LH3BV60 316 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 PPM1BO75688 479 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 RPP14O95059 124 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 IFNGR1P15260 489 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ADRA2CP18825 462 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 CDKN2AP42771 156 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 RPS4XP62701 263 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 IL10RAQ13651 578 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ISXQ2M1V0 245 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 LEG1Q6P5S2 330 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 HDDC2Q7Z4H3 204 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF511Q8NB15 262 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 RCBTB1Q8NDN9 531 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 THEM6Q8WUY1 208 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 SPACA7Q96KW9 195 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 UTP23Q9BRU9 249 aaKnown RBP16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 KLHDC2Q9Y2U9 406 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 C2orf74A8MZ97 194 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 TMEM127O75204 238 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 CTSBP07858 339 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 GIPP09681 153 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 OR8G3PP0DMU2 310 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 CPN1P15169 458 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 TAS2R20P59543 309 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 PPP1CAP62136 330 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ZP2Q05996 745 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 NNATQ16517 81 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 MANEAQ5SRI9 462 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ZNF626Q68DY1 528 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ADGRG3Q86Y34 549 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 OR9A4Q8NGU2 314 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 MIB2Q96AX9 1013 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 ELMOD3Q96FG2 381 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 WBP1Q96G27 269 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 Q96M85 177 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 SFXN2Q96NB2 322 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 RXFP3Q9NSD7 469 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 LRIT1Q9P2V4 623 aa16.72■□□□□ 0.27
PCDHA1-202ENST00000394633 OR2M5A3KFT3 312 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 APBB3O95704 486 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 TMIGD3P0DMS9 266 aaPredicted RBP16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 ART1P52961 327 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 PSMA6P60900 246 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 MRPS10P82664 201 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 SFTPA2Q8IWL1 248 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 MEIOBQ8N635 442 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 ASB12Q8WXK4 309 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 RBPMSQ93062 196 aaKnown RBP16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 TSSK2Q96PF2 358 aa16.71■□□□□ 0.27
PCDHA1-202ENST00000394633 A0A0J9YY10 115 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 TMEM72A0PK05 275 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 EFCAB7A8K855 629 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 ACOT7O00154 380 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 UPK3AO75631 287 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 NDUFB6O95139 128 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 SOX2P48431 317 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 CBFBQ13951 182 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 ALG11Q2TAA5 492 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 SLC6A19Q695T7 634 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 OR5M10Q6IEU7 315 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 DND1Q8IYX4 353 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 DNAAF1Q8NEP3 725 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 C3orf49Q96BT1 292 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 GPX7Q96SL4 187 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 MRI1Q9BV20 369 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 TCF7L1Q9HCS4 588 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 HCN3Q9P1Z3 774 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 MRM2Q9UI43 246 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 SCML1Q9UN30 329 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 IGKV1D-42A0A075B6H8 117 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 TUBAL3A6NHL2 446 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 CREBL2O60519 120 aaPredicted RBP16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 CSTAP01040 98 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 IFNA16P05015 189 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 IL5P05113 134 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 MNDAP41218 407 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 MECP2P51608 486 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 PLA2G7Q13093 441 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 ALKBH1Q13686 389 aaKnown RBP16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 UBXN2BQ14CS0 331 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 Q499Y3 187 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 C3P1Q6ZMU1 363 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 LRRTM1Q86UE6 522 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 GPAT4Q86UL3 456 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 EXD3Q8N9H8 876 aa16.7■□□□□ 0.26
PCDHA1-202ENST00000394633 OR4C3Q8NH37 302 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms