RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 MBLAC1A4D2B0 266 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 GPR39O43194 453 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ITGBL1O95965 494 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 PLGP00747 810 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RAB40ALP0C0E4 278 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 OR8U9P0C7N5 309 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SDC1P18827 310 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 THBS4P35443 961 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CASRP41180 1078 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CLDN12P56749 244 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RHOAP61586 193 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SLBPQ14493 270 aaKnown RBP eCLIP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ELFN2Q5R3F8 820 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 C19orf48Q6RUI8 117 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 LCTLQ6UWM7 567 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 LRRC18Q8N456 261 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 HSD17B11Q8NBQ5 300 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MDGA1Q8NFP4 955 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 M1APQ8TC57 530 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RAB40AQ8WXH6 277 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SLC6A7Q99884 636 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MENTQ9BUN1 341 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SRMSQ9H3Y6 488 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SMOC1Q9H4F8 434 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 RCC2Q9P258 522 aaKnown RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SDK1Q7Z5N4 2213 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 A0A1W2PQ45 241 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 A0A1W2PQY0 241 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 IQCF5A8MTL0 148 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MFNGO00587 321 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 GAPDHSO14556 408 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 HOXC4P09017 264 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CYBAP13498 195 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 TACR1P25103 407 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 GALNSP34059 522 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MC3RP41968 323 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CAV2P51636 162 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 PIN1Q13526 163 aaPredicted RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CBFBQ13951 182 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 BOP1Q14137 746 aaKnown RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 NKPD1Q17RQ9 610 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SLC25A35Q3KQZ1 300 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ARMC12Q5T9G4 340 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 AWAT2Q6E213 333 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 S100A7AQ86SG5 101 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CPOQ8IVL8 374 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 PNLDC1Q8NA58 520 aaKnown RBP7.05□□□□□ -1.28
VTI1A-201ENST00000393077 NUDCD2Q8WVJ2 157 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 DYRK2Q92630 601 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 NKD1Q969G9 470 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 AP1S3Q96PC3 154 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 KXD1Q9BQD3 176 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 NIPSNAP3BQ9BS92 247 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 PBX4Q9BYU1 374 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SMIM3Q9BZL3 60 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 CHST5Q9GZS9 411 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ATG10Q9H0Y0 220 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 ARV1Q9H2C2 271 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 HIPK2Q9H2X6 1198 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 FBRSQ9HAH7 460 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 TAF9BQ9HBM6 251 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SLC6A13Q9NSD5 602 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 NPTNQ9Y639 398 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 SSC5DA1L4H1 1573 aa7.05□□□□□ -1.28
VTI1A-201ENST00000393077 MAFKO60675 156 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ABLIM3O94929 683 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SCGB1D2O95969 90 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 FAM157BP0CG42 384 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MSX1P28360 303 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 CD96P40200 585 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SOX2P48431 317 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF41P51814 821 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SMAD3P84022 425 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 DBX2Q6ZNG2 339 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 P4HA3Q7Z4N8 544 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 GALNTL5Q7Z4T8 443 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 TEX26Q8N6G2 289 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ZNF296Q8WUU4 475 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MRGPRX4Q96LA9 322 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 GPR87Q9BY21 358 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 RAB33BQ9H082 229 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 SLC25A18Q9H1K4 315 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ASB8Q9H765 288 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 APMAPQ9HDC9 416 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MRPL17Q9NRX2 175 aaKnown RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MYOTQ9UBF9 498 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ASB1Q9Y576 335 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 NUMA1Q14980 2115 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 A0A0A6YYC8 382 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 KDM4EB2RXH2 506 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 I3L1I5 382 aaPredicted RBP7.04□□□□□ -1.28
VTI1A-201ENST00000393077 EOMESO95936 686 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ACTL6AO96019 429 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 B3GALT4O96024 378 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ACRP10323 421 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 ALPPL2P10696 532 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 MAKP20794 623 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 AGAP20933 346 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 UQCRC2P22695 453 aa7.04□□□□□ -1.28
VTI1A-201ENST00000393077 CD200P41217 278 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms