RNA–Protein interactions for RNA: ENST00000390489.1

TRAJ48-201, Transcript of T cell receptor alpha joining 48, humanhuman

APPRIS P1 BASIC

Gene TRAJ48, Length 63 nt, Biotype TR J gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ48-201ENST00000390489 IGLV2-8P01709 118 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 APCSP02743 223 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 BCHEP06276 602 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 UQCRFS1P1P0C7P4 283 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 AKT2P31751 481 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 COPB2P35606 906 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 CSNK1A1P48729 337 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 CRYBB1P53674 252 aaPredicted RBP0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 PKNOX1P55347 436 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 STARD6P59095 220 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 GABPB1Q06547 395 aaPredicted RBP0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 RABL6Q3YEC7 729 aaPredicted RBP0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ABHD13Q7L211 337 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ZNF546Q86UE3 836 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 MINDY2Q8NBR6 621 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 FBXL13Q8NEE6 735 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 NOXO1Q8NFA2 376 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 OR5M1Q8NGP8 315 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 OR13G1Q8NGZ3 307 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 COQ8AQ8NI60 647 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ABHD3Q8WU67 409 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 GEMIN6Q8WXD5 167 aaKnown RBP0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 FCGR1BQ92637 280 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 NEURL3Q96EH8 262 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 NIPSNAP3BQ9BS92 247 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ZSCAN5AQ9BUG6 496 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 CAPS2Q9BXY5 557 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ACTR6Q9GZN1 396 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 C2orf40Q9H1Z8 148 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 RHOJQ9H4E5 214 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 DHX33Q9H6R0 707 aaKnown RBP0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 UBE2ZQ9H832 354 aaPredicted RBP0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 PARP11Q9NR21 331 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 AGPAT5Q9NUQ2 364 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 CALYQ9NYX4 217 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 SPATA7Q9P0W8 599 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 SEC14L3Q9UDX4 400 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ZNF639Q9UID6 485 aa0.39□□□□□ -2.35
TRAJ48-201ENST00000390489 ANKRD12Q6UB98 2062 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 NACADO15069 1562 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 CENPVL3A0A0U1RRI6 287 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 A8MUI8 341 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 NPIPA7E9PJI5 369 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 G3V4G9 280 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 CLDN5O00501 218 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 OVOL1O14753 267 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 TAPBPO15533 448 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 SSX5O60225 188 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 TOM1L1O75674 476 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 CA1P00915 261 aaPredicted RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 IGKV1-16P04430 117 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 HLA-DPB1P04440 258 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 NPIPA8P0DM63 369 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 POLR2EP19388 210 aaKnown RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 FUSP35637 526 aaKnown RBP eCLIP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 PTGFRP43088 359 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 CDH4P55283 916 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 RPS14P62263 151 aaKnown RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 NCBP1Q09161 790 aaKnown RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 FUT5Q11128 374 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 IFT88Q13099 833 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 PRPSAP1Q14558 356 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 CCDC40Q4G0X9 1142 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 ETFRF1Q6IPR1 90 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 PEX26Q7Z412 305 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 ADM2Q7Z4H4 148 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 THOC6Q86W42 341 aaKnown RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 STPG2Q8N412 459 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 TMEM105Q8N8V8 129 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 OR5L2Q8NGL0 311 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 KLF14Q8TD94 323 aaPredicted RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 C15orf40Q8WUR7 153 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 SLC25A46Q96AG3 418 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 TMEM159Q96B96 161 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 C12orf66Q96MD2 445 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 NSMCE2Q96MF7 247 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 AMDHD1Q96NU7 426 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 VPS35Q96QK1 796 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 MRPL45Q9BRJ2 306 aaKnown RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 GBA3Q9H227 469 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 RNF167Q9H6Y7 350 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 ECT2Q9H8V3 914 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 FBXO6Q9NRD1 293 aaPredicted RBP0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 UVRAGQ9P2Y5 699 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 ENOPH1Q9UHY7 261 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 NPIPA1Q9UND3 350 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 RASD1Q9Y272 281 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 ABCC4O15439 1325 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 RPGRIP1LQ68CZ1 1315 aa0.38□□□□□ -2.35
TRAJ48-201ENST00000390489 A0A0U1RQV1 116 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 FAM230AA0A1W2PPH8 454 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 CFAP73A6NFT4 308 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 IGHG4P01861 327 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 GAPDHP04406 335 aaKnown RBP0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 IFI30P13284 250 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 HSPA1LP34931 641 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 TNNT3P45378 269 aaPredicted RBP0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 TDO2P48775 406 aa0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 NCBP2P52298 156 aaKnown RBP eCLIP0.37□□□□□ -2.35
TRAJ48-201ENST00000390489 RBX1P62877 108 aa0.37□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms