RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 SLC30A2Q9BRI3 323 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF160Q9HCG1 818 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 TMEM9BQ9NQ34 198 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 SERINC1Q9NRX5 453 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 ST6GALNAC2Q9UJ37 374 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 TCFL5Q9UL49 500 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 COPS3Q9UNS2 423 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 EML6Q6ZMW3 1958 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 LOC110117498-PIK3R3F6TDL0 507 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 RGS5O15539 181 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 CCDC58Q4VC31 144 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 DCDC5Q6ZRR9 648 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 PELI1Q96FA3 418 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 FRMD6Q96NE9 622 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 MNTQ99583 582 aa22.73■■□□□ 1.23
SHOX2-201ENST00000389589 GPR179Q6PRD1 2367 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 A0A1W2PRG6 482 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 FAM171A2A8MVW0 826 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 H7C1C5 153 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 CD1AP06126 327 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 TCN2P20062 427 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 TNFSF8P32971 234 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 SSR4P51571 173 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 LCN6P62502 163 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 SLC3A1Q07837 685 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF181Q2M3W8 571 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 IL20RBQ6UXL0 311 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 OR6V1Q8N148 313 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 FADS6Q8N9I5 356 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 ZNF511Q8NB15 262 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 EDEM2Q9BV94 578 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 PTGES2Q9H7Z7 377 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 CMAHPQ9Y471 501 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 HRH3Q9Y5N1 445 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 UPK1BO75841 260 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 ICAM2P13598 275 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 MTNR1BP49286 362 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 CENPAP49450 140 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 SIRPAP78324 504 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 IFITM3Q01628 133 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 RPL22L1Q6P5R6 122 aaKnown RBP22.72■■□□□ 1.23
SHOX2-201ENST00000389589 TIGD4Q8IY51 512 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 ARMC10Q8N2F6 343 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 CENPSQ8N2Z9 138 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 CT55Q8WUE5 264 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 NXPE2Q96DL1 559 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 COX4I2Q96KJ9 171 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 PGLYRP3Q96LB9 341 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 SYT4Q9H2B2 425 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 GNG8Q9UK08 70 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 FKBP7Q9Y680 259 aa22.72■■□□□ 1.23
SHOX2-201ENST00000389589 PRSS37A4D1T9 235 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 DCTN6O00399 190 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 PLGP00747 810 aaPredicted RBP22.71■■□□□ 1.23
SHOX2-201ENST00000389589 PUDPQ08623 228 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 LYPD4Q6UWN0 246 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 H1FNTQ75WM6 255 aaPredicted RBP22.71■■□□□ 1.23
SHOX2-201ENST00000389589 TIPARPQ7Z3E1 657 aaKnown RBP22.71■■□□□ 1.23
SHOX2-201ENST00000389589 PPP1R32Q7Z5V6 425 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 KCTD20Q7Z5Y7 419 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 RPS19BP1Q86WX3 136 aaKnown RBP22.71■■□□□ 1.23
SHOX2-201ENST00000389589 PM20D2Q8IYS1 436 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 MINDY2Q8NBR6 621 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 OR4K17Q8NGC6 315 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 ABHD4Q8TB40 342 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 ARL5BQ96KC2 179 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 TTTY10Q9BZA0 68 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 CDCP1Q9H5V8 836 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 VSX1Q9NZR4 365 aaPredicted RBP22.71■■□□□ 1.23
SHOX2-201ENST00000389589 UGT2A1Q9Y4X1 527 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 WDFY4Q6ZS81 3184 aa22.71■■□□□ 1.23
SHOX2-201ENST00000389589 ISPDA4D126 451 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 SLC35F4A4IF30 521 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 SERPINA3P01011 423 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 TFPIP10646 304 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 CFL1P23528 166 aaKnown RBP22.7■■□□□ 1.23
SHOX2-201ENST00000389589 TGM4P49221 684 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 ATP1A4Q13733 1029 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 INSL4Q14641 139 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 SSPNQ14714 243 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 CDK5R1Q15078 307 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 OR7A5Q15622 319 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 RPTNQ6XPR3 784 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 PLEKHG7Q6ZR37 379 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 POC1BQ8TC44 478 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 SMIM19Q96E16 107 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 MROQ9BYG7 248 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 SPRY4Q9C004 299 aa22.7■■□□□ 1.23
SHOX2-201ENST00000389589 FARSAQ9Y285 508 aaKnown RBP22.7■■□□□ 1.23
SHOX2-201ENST00000389589 EIF1P41567 113 aaKnown RBP22.7■■□□□ 1.22
SHOX2-201ENST00000389589 BLVRAP53004 296 aa22.7■■□□□ 1.22
SHOX2-201ENST00000389589 MLF1P58340 268 aa22.7■■□□□ 1.22
SHOX2-201ENST00000389589 EIF3IQ13347 325 aaKnown RBP22.7■■□□□ 1.22
SHOX2-201ENST00000389589 HAVCR2Q8TDQ0 301 aa22.7■■□□□ 1.22
SHOX2-201ENST00000389589 GHSRQ92847 366 aa22.7■■□□□ 1.22
SHOX2-201ENST00000389589 MARCH7Q9H992 704 aa22.7■■□□□ 1.22
SHOX2-201ENST00000389589 DAPK2Q9UIK4 370 aa22.7■■□□□ 1.22
SHOX2-201ENST00000389589 hCG_2014768A0A024R1R8 64 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 CCDC187A0A096LP49 1063 aa22.69■■□□□ 1.22
SHOX2-201ENST00000389589 NPIPB13A6NJU9 1138 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms