RNA–Protein interactions for RNA: ENST00000384540.1

RNU6-601P-201, Transcript of RNA, U6 small nuclear 601, pseudogene, humanhuman

BASIC

Gene RNU6-601P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-601P-201ENST00000384540 NAMPTP43490 491 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 CYB561P49447 251 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 NCBP2P52298 156 aaKnown RBP eCLIP0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 STARD6P59095 220 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 VGLL4Q14135 290 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 CARD16Q5EG05 197 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 TMEM225Q6GV28 225 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4L9Q6RFH8 374 aaPredicted RBP0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 PGAP1Q75T13 922 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 STPG2Q8N412 459 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 ZADH2Q8N4Q0 377 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 STXBP6Q8NFX7 210 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 RTN4IP1Q8WWV3 396 aaPredicted RBP0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 MRPL38Q96DV4 380 aaKnown RBP0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 TVP23CQ96ET8 276 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 SH3YL1Q96HL8 342 aaPredicted RBP0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 NARS2Q96I59 477 aaKnown RBP0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 TSSK3Q96PN8 268 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 RIT2Q99578 217 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 CCT7Q99832 543 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 SLC17A5Q9NRA2 495 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 GPATCH2LQ9NWQ4 482 aa0.94□□□□□ -2.26
RNU6-601P-201ENST00000384540 SORL1Q92673 2214 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 TNS2Q63HR2 1409 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 IGHV3-74A0A0B4J1X5 117 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 CHADO15335 359 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 ZSCAN12O43309 604 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 BCAS1O75363 584 aaPredicted RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 DEDDO75618 318 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 SLC25A14O95258 325 aaPredicted RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 MBD3O95983 291 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 C1GALT1C1LP0DN25 315 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 FOLR1P15328 257 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 PCMT1P22061 227 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 P2RY1P47900 373 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 CX3CR1P49238 355 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 FLI1Q01543 452 aaPredicted RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 ZNF616Q08AN1 781 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 NCBP1Q09161 790 aaKnown RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 CEBPEQ15744 281 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 HES5Q5TA89 166 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 RAB12Q6IQ22 244 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 RBM43Q6ZSC3 357 aaKnown RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 MRPL43Q8N983 215 aaKnown RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 NEURL3Q96EH8 262 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 DPH5Q9H2P9 285 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 REEP4Q9H6H4 257 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 YY1AP1Q9H869 796 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 HOXC10Q9NYD6 342 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 GPATCH8Q9UKJ3 1502 aaKnown RBP0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 KDRP35968 1356 aa0.93□□□□□ -2.26
RNU6-601P-201ENST00000384540 A0A1B0GW55 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 CCDC182A6NF36 153 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 ZNF878C9JN71 531 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 F5H6K3 240 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 RASGRF2O14827 1237 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 NEBLO76041 1014 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 CCNE2O96020 404 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4L2P0CJ85 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4L3P0CJ86 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4L5P0CJ88 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4L6P0CJ89 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4L7P0CJ90 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 TNNI3P19429 210 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 SOX6P35712 828 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 KLRC3Q07444 240 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 PDIA2Q13087 525 aaKnown RBP0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 IL15RAQ13261 267 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 GGTA1PQ4G0N0 100 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 BEND3Q5T5X7 828 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 UNQ9165/PRO28630Q6UXU0 137 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 LINC00173Q6ZV60 143 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 STRADAQ7RTN6 431 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 C7orf34Q96L11 122 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 TUBGCP2Q9BSJ2 902 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 SPXQ9BT56 116 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 GABARAPL3Q9BY60 117 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 RAB34Q9BZG1 259 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 TMEM117Q9H0C3 514 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 GBA3Q9H227 469 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 LHX5Q9H2C1 402 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 MEAF6Q9HAF1 191 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 THUMPD1Q9NXG2 353 aaKnown RBP0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 GIN1Q9NXP7 522 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 IL36GQ9NZH8 169 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DUX4Q9UBX2 424 aa0.92□□□□□ -2.26
RNU6-601P-201ENST00000384540 DNASE2O00115 360 aaPredicted RBP0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 LGALS9O00182 355 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 OR1F1O43749 312 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 RP2O75695 350 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 CD99P14209 185 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 IMPDH1P20839 514 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 MMP11P24347 488 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 HTR2AP28223 471 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 IL12AP29459 219 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 OPRK1P41145 380 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 CRYBB1P53674 252 aaPredicted RBP0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 PRRX1P54821 245 aa0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 MEF2CQ06413 473 aaPredicted RBP0.91□□□□□ -2.26
RNU6-601P-201ENST00000384540 AP1B1Q10567 949 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms