RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 SPATA7Q9P0W8 599 aa0.66□□□□□ -2.3
RNU6-1040P-201ENST00000383974 CARMIL1Q5VZK9 1371 aa0.66□□□□□ -2.3
RNU6-1040P-201ENST00000383974 WDR62O43379 1518 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 COL5A3P25940 1745 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 IGHV3OR16-8A0A075B7F1 116 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 A0A0U1RQV5 110 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SYCE3A1L190 88 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 UBXN8O00124 270 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TNFSF9P41273 254 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 AP3M2P53677 418 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 RPS11P62280 158 aaKnown RBP eCLIP0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PDIA2Q13087 525 aaKnown RBP0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 MXD4Q14582 209 aaPredicted RBP0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 C2orf76Q3KRA6 126 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 OR52E8Q6IFG1 317 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 NIPAL3Q6P499 406 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 STRADAQ7RTN6 431 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ZADH2Q8N4Q0 377 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 VN1R2Q8NFZ6 395 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 FGF14Q92915 247 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CABS1Q96KC9 395 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CAMK2N2Q96S95 79 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TM2D3Q9BRN9 247 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GABARAPL3Q9BY60 117 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 POPDC2Q9HBU9 364 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 KLHL28Q9NXS3 571 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CALYQ9NYX4 217 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 COPS3Q9UNS2 423 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 RASD1Q9Y272 281 aa0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 HELZ2Q9BYK8 2649 aaKnown RBP0.65□□□□□ -2.31
RNU6-1040P-201ENST00000383974 UBE4BO95155 1302 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 IGHV3-74A0A0B4J1X5 117 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CLDN5O00501 218 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CTAGE5O15320 804 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SOCS1O15524 211 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TAPBPO15533 448 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GABARAPO95166 117 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 IGHDP01880 384 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 BCHEP06276 602 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PCMT1P22061 227 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GDI2P50395 445 aaKnown RBP0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GINS1Q14691 196 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SLC25A52Q3SY17 297 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ST20-AS1Q8NBB2 130 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 OR5M1Q8NGP8 315 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 LINC01560Q8TB33 94 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GEMIN6Q8WXD5 167 aaKnown RBP0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TMEM186Q96B77 213 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 NIPSNAP3BQ9BS92 247 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SHANK2-AS3Q9BTD1 123 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ZSCAN5AQ9BUG6 496 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 RBKSQ9H477 322 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 FBXO6Q9NRD1 293 aaPredicted RBP0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GSTK1Q9Y2Q3 226 aa0.64□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CEMIPQ8WUJ3 1361 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SSX5O60225 188 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 RP2O75695 350 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 RHOBTB1O94844 696 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 IGHG4P01861 327 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PRB1P04280 392 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ZNF806P0C7X5 589 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ARL14EPLP0DKL9 152 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PSMA2P25787 234 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GSSP48637 474 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TNFRSF17Q02223 184 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TNFRSF9Q07011 255 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TP53I3Q53FA7 332 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SMUG1Q53HV7 270 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 SAXO2Q658L1 398 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 TPGS2Q68CL5 300 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 FAM71F2Q6NXP2 309 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ZFP1Q6P2D0 407 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PRMT9Q6P2P2 845 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PGAP1Q75T13 922 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 OAFQ86UD1 273 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GMCL1P1Q8NEA9 526 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CREB3L1Q96BA8 519 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 RUFY1Q96T51 708 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 UGT1A7Q9HAW7 530 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 UGT1A10Q9HAW8 530 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 UGT1A8Q9HAW9 530 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GNG12Q9UBI6 72 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 FETUBQ9UGM5 382 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 BAHCC1Q9P281 2608 aa0.63□□□□□ -2.31
RNU6-1040P-201ENST00000383974 A0A1W2PNV4 684 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 A0A1W2PRQ8 180 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ZNF98A6NK75 572 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 KMOO15229 486 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 LRATO95237 230 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 APCSP02743 223 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 GAPDHP04406 335 aaKnown RBP0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ADRA1AP35348 466 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CXCL12P48061 93 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CSNK1A1P48729 337 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CRYBB1P53674 252 aaPredicted RBP0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PLA2G16P53816 162 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 CDH4P55283 916 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 PRKCDQ05655 676 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 AQP6Q13520 282 aa0.62□□□□□ -2.31
RNU6-1040P-201ENST00000383974 ZNF235Q14590 738 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms