RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 P2RY4P51582 365 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 CSNK2A1P68400 391 aaPredicted RBP24.02■■□□□ 1.44
MSX1-201ENST00000382723 KLHL22Q53GT1 634 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 RNFT1Q5M7Z0 435 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 TMEM225Q6GV28 225 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 OR51L1Q8NGJ5 315 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 TM9SF4Q92544 642 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 DDOQ99489 341 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 RPRD1BQ9NQG5 326 aaKnown RBP24.02■■□□□ 1.44
MSX1-201ENST00000382723 IGHV3-15A0A0B4J1V0 119 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 NPIPA5E9PKD4 350 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 XKRYO14609 159 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 RAMP1O60894 148 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 IFNGR1P15260 489 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 SUCLG1P53597 346 aaKnown RBP24.02■■□□□ 1.44
MSX1-201ENST00000382723 HSF1Q00613 529 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 FAM109AQ8N4B1 249 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 SVOPQ8N4V2 548 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 ADPRHL1Q8NDY3 354 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 TEAD3Q99594 435 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 DEFB127Q9H1M4 99 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 B3GAT1Q9P2W7 334 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 NPIPA1Q9UND3 350 aa24.02■■□□□ 1.44
MSX1-201ENST00000382723 PCDHGA9Q9Y5G4 932 aaKnown RBP24.02■■□□□ 1.44
MSX1-201ENST00000382723 A0A1W2PNV4 684 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 CCDC182A6NF36 153 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 AQP7P3A6NL99 342 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 K7ENP7 123 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 M0R3G1 203 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 IGHMP01871 453 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 SLC2A5P22732 501 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 ATP6V1E1P36543 226 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 RAB40BQ12829 278 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 SLC10A1Q14973 349 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 HBMQ6B0K9 141 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 INO80CQ6PI98 192 aaPredicted RBP24.01■■□□□ 1.43
MSX1-201ENST00000382723 PAQR6Q6TCH4 344 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 PXKQ7Z7A4 578 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 ZNF519Q8TB69 540 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 SRXN1Q9BYN0 137 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 ASB6Q9NWX5 421 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 MED29Q9NX70 200 aa24.01■■□□□ 1.43
MSX1-201ENST00000382723 LINC01387J3KSC0 135 aa24■■□□□ 1.43
MSX1-201ENST00000382723 ITGB2P05107 769 aa24■■□□□ 1.43
MSX1-201ENST00000382723 BORAQ6PGQ7 559 aa24■■□□□ 1.43
MSX1-201ENST00000382723 LRRC69Q6ZNQ3 347 aa24■■□□□ 1.43
MSX1-201ENST00000382723 SLC35D2Q76EJ3 337 aa24■■□□□ 1.43
MSX1-201ENST00000382723 OR4F15Q8NGB8 312 aa24■■□□□ 1.43
MSX1-201ENST00000382723 OR51G2Q8NGK0 314 aa24■■□□□ 1.43
MSX1-201ENST00000382723 KISS1RQ969F8 398 aaPredicted RBP24■■□□□ 1.43
MSX1-201ENST00000382723 TSSK2Q96PF2 358 aa24■■□□□ 1.43
MSX1-201ENST00000382723 ACOT13Q9NPJ3 140 aa24■■□□□ 1.43
MSX1-201ENST00000382723 QPCTLQ9NXS2 382 aa24■■□□□ 1.43
MSX1-201ENST00000382723 WARS2Q9UGM6 360 aaKnown RBP24■■□□□ 1.43
MSX1-201ENST00000382723 PCDHGB1Q9Y5G3 927 aa24■■□□□ 1.43
MSX1-201ENST00000382723 SLC22A31A6NKX4 558 aa24■■□□□ 1.43
MSX1-201ENST00000382723 RAB36O95755 333 aa24■■□□□ 1.43
MSX1-201ENST00000382723 BCL10O95999 233 aa24■■□□□ 1.43
MSX1-201ENST00000382723 CARD18P57730 90 aa24■■□□□ 1.43
MSX1-201ENST00000382723 ESPNLQ6ZVH7 1005 aa24■■□□□ 1.43
MSX1-201ENST00000382723 TRILQ7L0X0 811 aa24■■□□□ 1.43
MSX1-201ENST00000382723 UEVLDQ8IX04 471 aa24■■□□□ 1.43
MSX1-201ENST00000382723 FAR1Q8WVX9 515 aa24■■□□□ 1.43
MSX1-201ENST00000382723 TXNDC15Q96J42 360 aa24■■□□□ 1.43
MSX1-201ENST00000382723 UCN2Q96RP3 112 aa24■■□□□ 1.43
MSX1-201ENST00000382723 NMNAT2Q9BZQ4 307 aa24■■□□□ 1.43
MSX1-201ENST00000382723 MRPS18AQ9NVS2 196 aaKnown RBP24■■□□□ 1.43
MSX1-201ENST00000382723 KLHL13Q9P2N7 655 aa24■■□□□ 1.43
MSX1-201ENST00000382723 LIPGQ9Y5X9 500 aa24■■□□□ 1.43
MSX1-201ENST00000382723 EIF1BO60739 113 aaKnown RBP23.99■■□□□ 1.43
MSX1-201ENST00000382723 RENP00797 406 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 PDGFAP04085 211 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 SPI1P17947 270 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 EIF1AXP47813 144 aaKnown RBP23.99■■□□□ 1.43
MSX1-201ENST00000382723 DAP3P51398 398 aaKnown RBP23.99■■□□□ 1.43
MSX1-201ENST00000382723 ARMC4Q5T2S8 1044 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 IGFL3Q6UXB1 125 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 OR2V1Q8NHB1 315 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 ZNRF4Q8WWF5 429 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 SRA1Q9HD15 236 aaKnown RBP23.99■■□□□ 1.43
MSX1-201ENST00000382723 FANCFQ9NPI8 374 aa23.99■■□□□ 1.43
MSX1-201ENST00000382723 FAM171A2A8MVW0 826 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 CXCL13O43927 109 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 INMTO95050 263 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 GSTT1P30711 240 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 CLDN15P56746 228 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 H3F3AP84243 136 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 SRYQ05066 204 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 RUNX1T1Q06455 604 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 C1DQ13901 141 aaKnown RBP23.98■■□□□ 1.43
MSX1-201ENST00000382723 PM20D2Q8IYS1 436 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 OR10D3Q8NH80 312 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 ASB10Q8WXI3 467 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 ZMYND19Q96E35 227 aaPredicted RBP23.98■■□□□ 1.43
MSX1-201ENST00000382723 NAA11Q9BSU3 229 aaPredicted RBP23.98■■□□□ 1.43
MSX1-201ENST00000382723 CDCA4Q9BXL8 241 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 SYT4Q9H2B2 425 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 RERGLQ9H628 205 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 LDAHQ9H6V9 325 aa23.98■■□□□ 1.43
MSX1-201ENST00000382723 NOX1Q9Y5S8 564 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms