RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 RPTNQ6XPR3 784 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 TRILQ7L0X0 811 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SNX33Q8WV41 574 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 GHSRQ92847 366 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SOSTQ9BQB4 213 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 PPIL3Q9H2H8 161 aaKnown RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 INIPQ9NRY2 104 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 GPN3Q9UHW5 284 aaPredicted RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 GRIP1Q9Y3R0 1128 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 PROB1E7EW31 1015 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 KLF7O75840 302 aaPredicted RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 LDOC1O95751 146 aaPredicted RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 CCL4P13236 92 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 PTBP1P26599 531 aaKnown RBP eCLIP17.38■□□□□ 0.372e-7■■■■□ 26.5
GMDS-201ENST00000380805 CAV3P56539 151 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SLC3A1Q07837 685 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 SLC6A19Q695T7 634 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 POMZP3Q6PJE2 187 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 XKRXQ6PP77 449 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 METAP1DQ6UB28 335 aaPredicted RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 KCTD20Q7Z5Y7 419 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 NR2C2APQ86WQ0 139 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 CDC20BQ86Y33 519 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 OR6V1Q8N148 313 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 THAP4Q8WY91 577 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 KCTD12Q96CX2 325 aaKnown RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 ZNF700Q9H0M5 742 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 GALNT9Q9HCQ5 603 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 PARD6AQ9NPB6 346 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 POLE4Q9NR33 117 aa17.38■□□□□ 0.37
GMDS-201ENST00000380805 EP300Q09472 2414 aaPredicted RBP17.38■□□□□ 0.37
GMDS-201ENST00000380805 IGHV1-45A0A0A0MS14 117 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 NPIPB13A6NJU9 1138 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 NPIPB4C9JG80 1138 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 DCTN6O00399 190 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 PLPP3O14495 311 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 SEC14L5O43304 696 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 GPRIN2O60269 458 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 TRIM3O75382 744 aaPredicted RBP17.37■□□□□ 0.37
GMDS-201ENST00000380805 ZNF806P0C7X5 589 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 GRPRP30550 384 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 GDI2P50395 445 aaKnown RBP17.37■□□□□ 0.37
GMDS-201ENST00000380805 DEFA1P59665 94 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 DEFA3P59666 94 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 RPL27P61353 136 aaKnown RBP17.37■□□□□ 0.37
GMDS-201ENST00000380805 ZP4Q12836 540 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 MRPL28Q13084 256 aaKnown RBP17.37■□□□□ 0.37
GMDS-201ENST00000380805 MFSD13AQ14CX5 517 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 HBMQ6B0K9 141 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 TMEM81Q6P7N7 255 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 LYPD4Q6UWN0 246 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 PRR23CQ6ZRP0 262 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 GHDCQ8N2G8 530 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 GDPD1Q8N9F7 314 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 SCAIQ8N9R8 606 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 POC5Q8NA72 575 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 RNF166Q96A37 237 aaPredicted RBP17.37■□□□□ 0.37
GMDS-201ENST00000380805 IMMP1LQ96LU5 166 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 TSSK2Q96PF2 358 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 TXNIPQ9H3M7 391 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 ACOXLQ9NUZ1 547 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 VSX1Q9NZR4 365 aaPredicted RBP17.37■□□□□ 0.37
GMDS-201ENST00000380805 FKBP7Q9Y680 259 aa17.37■□□□□ 0.37
GMDS-201ENST00000380805 TRAV1-2A0A0B4J238 106 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 LNP1A1A4G5 178 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 C9J4A7 227 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 SERPINI2O75830 405 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 GATBO75879 557 aaKnown RBP17.36■□□□□ 0.37
GMDS-201ENST00000380805 OR2J2O76002 312 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 ACVR1BP36896 505 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 CENPAP49450 140 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 RPS11P62280 158 aaKnown RBP eCLIP17.36■□□□□ 0.37
GMDS-201ENST00000380805 RIN1Q13671 783 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 ACSM3Q53FZ2 586 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 MZT2AQ6P582 158 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 ASCL5Q7RTU5 278 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 CEACAM19Q7Z692 300 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 DRAXINQ8NBI3 349 aaPredicted RBP17.36■□□□□ 0.37
GMDS-201ENST00000380805 MFSD8Q8NHS3 518 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 PHYHIPQ92561 330 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 SPACA9Q96E40 222 aaPredicted RBP17.36■□□□□ 0.37
GMDS-201ENST00000380805 RASL10BQ96S79 203 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 TTYH2Q9BSA4 534 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 DEFB126Q9BYW3 111 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 SDHAF3Q9NRP4 125 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 RYDENQ9NUL5 291 aaKnown RBP17.36■□□□□ 0.37
GMDS-201ENST00000380805 RHBDL2Q9NX52 303 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 WIF1Q9Y5W5 379 aa17.36■□□□□ 0.37
GMDS-201ENST00000380805 SMIM30A4D0T7 59 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 PRR32B1ATL7 298 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 FLRT2O43155 660 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 COX6A1P12074 109 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 MYL9P24844 172 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 SHC1P29353 583 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 EXT1Q16394 746 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 ACKR1Q16570 336 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 FAM199XQ6PEV8 388 aaPredicted RBP17.35■□□□□ 0.37
GMDS-201ENST00000380805 ZNF511Q8NB15 262 aa17.35■□□□□ 0.37
GMDS-201ENST00000380805 NLGN4YQ8NFZ3 816 aaPredicted RBP17.35■□□□□ 0.37
GMDS-201ENST00000380805 OR2Y1Q8NGV0 311 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms