RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PMS2P3Q13401 168 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 MFSD13AQ14CX5 517 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 LRRC23Q53EV4 343 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 OR7E24Q6IFN5 339 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 C11orf71Q6IPW1 123 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CGB2Q6NT52 195 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TREML4Q6UXN2 200 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 LRRC75A-AS1Q8N1F1 130 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 OR6N1Q8NGY5 312 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 NSMAFQ92636 917 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 C1orf159Q96HA4 380 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 C7orf26Q96N11 449 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 PIP5K1AQ99755 562 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TMEM120AQ9BXJ8 343 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CBLN4Q9NTU7 201 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TMEM45AQ9NWC5 275 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 PARPBPQ9NWS1 579 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SLC9A8Q9Y2E8 581 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CACNG2Q9Y698 323 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 VWFP04275 2813 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 YLPM1P49750 1951 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 A0A096LPI6 279 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 IGKV1D-43A0A0B4J1Z2 117 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SLCO1B7G3V0H7 640 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TRAF3IP2O43734 574 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 PIP5K1CO60331 668 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF432O94892 652 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SLC2A10O95528 541 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 VIMP08670 466 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 GLO1Q04760 184 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SNTB2Q13425 540 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TOP3AQ13472 1001 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RAB39AQ14964 217 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 FAM69AQ5T7M9 428 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RNF220Q5VTB9 566 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 NANOGP8Q6NSW7 305 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CLEC2AQ6UVW9 174 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RINLQ6ZS11 566 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 VTCN1Q7Z7D3 282 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 DEPDC4Q8N2C3 294 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 GPR137CQ8N3F9 429 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 FAM156AQ8NDB6 213 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SLC26A7Q8TE54 656 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 BCL2L2Q92843 193 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 PMM1Q92871 262 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 MSI2Q96DH6 328 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ANKRD27Q96NW4 1050 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SLC38A2Q96QD8 506 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 OR2M2Q96R28 347 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TNFRSF13CQ96RJ3 184 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CGREF1Q99674 301 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 DHRS9Q9BPW9 319 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SPATA9Q9BWV2 254 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RAD21L1Q9H4I0 556 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RERGLQ9H628 205 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 NANOGQ9H9S0 305 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CACYBPQ9HB71 228 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 GPR35Q9HC97 309 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 MEPEQ9NQ76 525 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 POLE3Q9NRF9 147 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RYDENQ9NUL5 291 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 FAIMQ9NVQ4 179 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF224Q9NZL3 707 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SLC13A4Q9UKG4 626 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CHD3Q12873 2000 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TGP01266 2768 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TRBV5-3A0A0A0MS03 114 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 A0A0B4J2E0 115 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 A0A1B0GX12 115 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 A8MV72 311 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 EVPLLA8MZ36 301 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RNF13O43567 381 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CRLF1O75462 422 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 DIRAS1O95057 198 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CLPTM1O96005 669 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZCCHC18P0CG32 403 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ARAFP10398 606 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 NCK1P16333 377 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 APOBEC3AP31941 199 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ANXA11P50995 505 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RAB1AP62820 205 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CCL8P80075 99 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 MMEL1Q495T6 779 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RUNDC3AQ59EK9 446 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 LRIF1Q5T3J3 769 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 PRSS57Q6UWY2 283 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF813Q6ZN06 617 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 H1FNTQ75WM6 255 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 RANBP3LQ86VV4 465 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF584Q8IVC4 421 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 SKA3Q8IX90 412 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZDHHC16Q969W1 377 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 KCNS3Q9BQ31 491 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 CPPED1Q9BRF8 314 aaPredicted RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 A4GALTQ9NPC4 353 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 TAS2R5Q9NYW4 299 aa4.04□□□□□ -1.76
C9orf72-203ENST00000380003 ZNF346Q9UL40 294 aaKnown RBP4.04□□□□□ -1.76
C9orf72-203ENST00000380003 LOC100289279A0A1B0GTE1 492 aa4.03□□□□□ -1.76
C9orf72-203ENST00000380003 RNF212BA8MTL3 300 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms