RNA–Protein interactions for RNA: ENST00000379404.5

SMS-201, Transcript of spermine synthase, humanhuman

TSL 3 BASIC

Gene SMS, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-201ENST00000379404 MGAT4BQ9UQ53 548 aa12.85□□□□□ -0.35
SMS-201ENST00000379404 MAGED1Q9Y5V3 778 aaPredicted RBP12.85□□□□□ -0.35
SMS-201ENST00000379404 HEATR1Q9H583 2144 aaKnown RBP12.85□□□□□ -0.35
SMS-201ENST00000379404 NIPBLQ6KC79 2804 aaeCLIP12.84□□□□□ -0.35
SMS-201ENST00000379404 SLC35F4A4IF30 521 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 M0R1B8 84 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 ARHGEF9O43307 516 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 KRT33AO76009 404 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 IGF2P01344 180 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 TSPAN19P0C672 248 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 HOXB1P14653 301 aaPredicted RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 NQO1P15559 274 aaKnown RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 GSK3BP49841 420 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 UGT2B15P54855 530 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 ARF1P84077 181 aaKnown RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 POU3F1Q03052 451 aaPredicted RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 B3GLCTQ6Y288 498 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 TSEN54Q7Z6J9 526 aaKnown RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 C10orf53Q8N6V4 93 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 PIK3C3Q8NEB9 887 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 LIPHQ8WWY8 451 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 CMTM5Q96DZ9 223 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 TRAF4Q9BUZ4 470 aaPredicted RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 ALG2Q9H553 416 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 CRNNQ9UBG3 495 aaPredicted RBP12.84□□□□□ -0.35
SMS-201ENST00000379404 ZNF229Q9UJW7 825 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 A4GNTQ9UNA3 340 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 SNX13Q9Y5W8 968 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 ZANQ9Y493 2812 aa12.84□□□□□ -0.35
SMS-201ENST00000379404 CXCR6O00574 342 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 FFAR1O14842 300 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 WNT11O96014 354 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 MT-ND1P03886 318 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 ADORA3P0DMS8 318 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 THRBP10828 461 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 RBM34P42696 430 aaKnown RBP12.83□□□□□ -0.36
SMS-201ENST00000379404 SH3BGRP55822 239 aaPredicted RBP12.83□□□□□ -0.36
SMS-201ENST00000379404 PSME3P61289 254 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 RPS4XP62701 263 aaKnown RBP12.83□□□□□ -0.36
SMS-201ENST00000379404 CEACAM16Q2WEN9 425 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 HMBOX1Q6NT76 420 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 DEF8Q6ZN54 512 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 CBLL1Q75N03 491 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 ZNF627Q7L945 461 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 YTHDF3Q7Z739 585 aaKnown RBP12.83□□□□□ -0.36
SMS-201ENST00000379404 VTCN1Q7Z7D3 282 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 CPLX4Q7Z7G2 160 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 FAM169BQ8N8A8 192 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 PFN4Q8NHR9 129 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 TMEM255BQ8WV15 326 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 CXorf56Q9H5V9 222 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 CRLF2Q9HC73 371 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 NANSQ9NR45 359 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 C20orf141Q9NUB4 165 aa12.83□□□□□ -0.36
SMS-201ENST00000379404 A0A096LPE4 126 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 IGHV1-18A0A0C4DH31 117 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 A0A1W2PPZ6 126 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 ZNF503-AS2A6NEH8 195 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 KPNA4O00629 521 aaPredicted RBP12.82□□□□□ -0.36
SMS-201ENST00000379404 AKAP8O43823 692 aaKnown RBP12.82□□□□□ -0.36
SMS-201ENST00000379404 IGLV1-44P01699 117 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 IFNGR1P15260 489 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 AHCYP23526 432 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 PAX7P23759 505 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 TTKP33981 857 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 NUDT2P50583 147 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 CDH11P55287 796 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 TAS2R41P59536 307 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 GNGT1P63211 74 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 LSM11P83369 360 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMS-201ENST00000379404 CAMK2DQ13557 499 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 C3orf36Q3SXR2 165 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 C11orf71Q6IPW1 123 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 GPR137CQ8N3F9 429 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 OR6X1Q8NH79 312 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 TMEM239Q8WW34 195 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 TPD52L3Q96J77 140 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 DHRS9Q9BPW9 319 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 GSX1Q9H4S2 264 aaPredicted RBP12.82□□□□□ -0.36
SMS-201ENST00000379404 MAN2C1Q9NTJ4 1040 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 B3GNT2Q9NY97 397 aa12.82□□□□□ -0.36
SMS-201ENST00000379404 ZNF99A8MXY4 864 aaPredicted RBP12.81□□□□□ -0.36
SMS-201ENST00000379404 C11orf98E9PRG8 122 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 M0R3G1 203 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 NDUFAB1O14561 156 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 PRSS23O95084 383 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 IGKV3-15P01624 115 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 FUT1P19526 365 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 TUBA1BP68363 451 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 TUBA4AP68366 448 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 IL1RL1Q01638 556 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 FXNQ16595 210 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 CARD17Q5XLA6 110 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 SLC22A25Q6T423 547 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 TUBA1AQ71U36 451 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 SLC35D2Q76EJ3 337 aa12.81□□□□□ -0.36
SMS-201ENST00000379404 CIARTQ8N365 385 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms