RNA–Protein interactions for RNA: ENST00000378034.7

CKAP2-202, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-202ENST00000378034 TSPO2Q5TGU0 170 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 SLC35D2Q76EJ3 337 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 SSX8Q7RTT4 187 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.69□□□□□ -0.54
CKAP2-202ENST00000378034 HDDC2Q7Z4H3 204 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 KISS1RQ969F8 398 aaPredicted RBP11.69□□□□□ -0.54
CKAP2-202ENST00000378034 RSRC1Q96IZ7 334 aaKnown RBP11.69□□□□□ -0.54
CKAP2-202ENST00000378034 LRR1Q96L50 414 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 OR2M2Q96R28 347 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 REEP1Q9H902 201 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 INIPQ9NRY2 104 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 SLC7A10Q9NS82 523 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 FREM1Q5H8C1 2179 aa11.69□□□□□ -0.54
CKAP2-202ENST00000378034 A0A1W2PRG6 482 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 SH3D21A4FU49 640 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF726A6NNF4 738 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 PDLIM1O00151 329 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 KRT33AO76009 404 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 GOSR1O95249 250 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 AQP2P41181 271 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 FAPQ12884 760 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 C1QTNF12Q5T7M4 302 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 TMEM123Q8N131 208 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 OR6X1Q8NH79 312 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 FAM46AQ96IP4 442 aaKnown RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 TAS2R16Q9NYV7 291 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 STX18Q9P2W9 335 aaKnown RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 ASH1LQ9NR48 2969 aaKnown RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 SLC35F4A4IF30 521 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 CENPBD1B2RD01 187 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 CDC42EP2O14613 210 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 KLF4O43474 513 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 OR10H3O60404 316 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 FKBP6O75344 327 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 BCL10O95999 233 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 CST1P01037 141 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 IGHV3-9P01782 118 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 EPXP11678 715 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 IFNGR1P15260 489 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 IGHV1-2P23083 117 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 IL32P24001 234 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 MPGP29372 298 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 CCKARP32238 428 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 GPR4P46093 362 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 DAP3P51398 398 aaKnown RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 TGFBR3Q03167 851 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 ZBED5Q49AG3 693 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 ALG10Q5BKT4 473 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 C1orf94Q6P1W5 598 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 BHLHA15Q7RTS1 189 aaPredicted RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF433Q8N7K0 673 aaPredicted RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 OR4C15Q8NGM1 316 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 MARVELD3Q96A59 401 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 DUS3LQ96G46 650 aaKnown RBP11.68□□□□□ -0.54
CKAP2-202ENST00000378034 TXNDC15Q96J42 360 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 MED29Q9NX70 200 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 CRIM1Q9NZV1 1036 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 HECTD1Q9ULT8 2610 aa11.68□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF587BE7ETH6 402 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 RPL36A-HNRNPH2H7BZ11 118 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 CLOCKO15516 846 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 PTP4A3O75365 173 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 FPR3P25089 353 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 FHL1Q13642 323 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 LAPTM4AQ15012 233 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 DAZAP2Q15038 168 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 OR7E24Q6IFN5 339 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 ZER1Q7Z7L7 766 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 P2RY8Q86VZ1 359 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 C20orf196Q8IYI0 205 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 GPR137CQ8N3F9 429 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 C1orf162Q8NEQ5 155 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 OR13C2Q8NGS9 318 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 OR51A7Q8NH64 312 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 MOSPD2Q8NHP6 518 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 LINC01560Q8TB33 94 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 GNPDA2Q8TDQ7 276 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 UTP4Q969X6 686 aaKnown RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 C14orf79Q96F83 325 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SLC25A44Q96H78 314 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 BOD1Q96IK1 185 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 WFIKKN1Q96NZ8 548 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 TNFRSF13CQ96RJ3 184 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 MED18Q9BUE0 208 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 ACTR6Q9GZN1 396 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 TXNIPQ9H3M7 391 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 B3GAT2Q9NPZ5 323 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 ZNF226Q9NYT6 803 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SAMHD1Q9Y3Z3 626 aaKnown RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 TRAV27A0A087WT01 109 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 UNC119BA6NIH7 251 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 GNGT2O14610 69 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SERPINI2O75830 405 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 CCNB2O95067 398 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 IGHMP01871 453 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 F13BP05160 661 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 DNAJA1P31689 397 aaKnown RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SH3BGRP55822 239 aaPredicted RBP11.67□□□□□ -0.54
CKAP2-202ENST00000378034 BIDP55957 195 aa11.67□□□□□ -0.54
CKAP2-202ENST00000378034 SNTB1Q13884 538 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms