RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CMAHPQ9Y471 501 aa12.8□□□□□ -0.36
HDAC6-204ENST00000376643 IGHV2OR16-5A0A0B4J2B6 119 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 NR5A2O00482 541 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 FMO6PO60774 539 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 LY6HO94772 140 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 NUDT7P0C024 238 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 DAOP14920 347 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 GIFP27352 417 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 ATP4BP51164 291 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TUBA1BP68363 451 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TUBA4AP68366 448 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 HOXC5Q00444 222 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 GALK2Q01415 458 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 LGALS3BPQ08380 585 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 PUDPQ08623 228 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 SCARB2Q14108 478 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 GSG1Q2KHT4 349 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TRMT5Q32P41 509 aaKnown RBP12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TUBA1AQ71U36 451 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 LINGO2Q7L985 606 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 ARMC8Q8IUR7 673 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 SLC30A8Q8IWU4 369 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 C20orf196Q8IYI0 205 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 KDM8Q8N371 416 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 HIPK4Q8NE63 616 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TAAR8Q969N4 342 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 MSI2Q96DH6 328 aaKnown RBP12.79□□□□□ -0.36
HDAC6-204ENST00000376643 SLC41A3Q96GZ6 507 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TMEM43Q9BTV4 400 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 BPESC1Q9GZL8 116 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 MS4A5Q9H3V2 200 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 TMBIM4Q9HC24 238 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
HDAC6-204ENST00000376643 MXRA5Q9NR99 2828 aa12.79□□□□□ -0.36
HDAC6-204ENST00000376643 FBN1P35555 2871 aaKnown RBP12.78□□□□□ -0.36
HDAC6-204ENST00000376643 A0A0B4J2E0 115 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 A0A1B0GX12 115 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 M0R3G1 203 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 TRAF3IP2O43734 574 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-204ENST00000376643 UBL3O95164 117 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 OR6A2O95222 327 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 STAMBPO95630 424 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 RAB36O95755 333 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 TGFAP01135 160 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 IGFBP5P24593 272 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 CALCRP30988 508 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 THBS4P35443 961 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 RBBP4Q09028 425 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 SCGB2A2Q13296 93 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 PMS2P3Q13401 168 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 SNTB2Q13425 540 aaKnown RBP12.78□□□□□ -0.36
HDAC6-204ENST00000376643 FAM120AOSQ5T036 256 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF613Q6PF04 617 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF627Q7L945 461 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 PXKQ7Z7A4 578 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 DPPA2Q7Z7J5 298 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 MDP1Q86V88 176 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 TMEM123Q8N131 208 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 ZNF786Q8N393 782 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 C10orf53Q8N6V4 93 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 ANKS4BQ8N8V4 417 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 CKAP2Q8WWK9 683 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 DOK1Q99704 481 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 PRR14Q9BWN1 585 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 ULBP2Q9BZM5 246 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 CCDC167Q9P0B6 97 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-204ENST00000376643 ARFGEF3Q5TH69 2177 aa12.78□□□□□ -0.36
HDAC6-204ENST00000376643 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 M0R233 179 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 SYNGR3O43761 229 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 TACSTD2P09758 323 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 CD79AP11912 226 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 HOXB9P17482 250 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-204ENST00000376643 GPX2P18283 190 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 NR4A1P22736 598 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 HTR2AP28223 471 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 HGFACQ04756 655 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 OR1Q1Q15612 314 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 ADRM1Q16186 407 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 AGBL2Q5U5Z8 902 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 GKAP1Q5VSY0 366 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-204ENST00000376643 ZNF813Q6ZN06 617 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 SVOPLQ8N434 492 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 C11orf65Q8NCR3 313 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 UBASH3BQ8TF42 649 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 STON2Q8WXE9 905 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 NOX3Q9HBY0 568 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 SLC25A37Q9NYZ2 338 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 GPR160Q9UJ42 338 aa12.77□□□□□ -0.37
HDAC6-204ENST00000376643 IGKV1D-42A0A075B6H8 117 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 SLC22A23A1A5C7 686 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 FARS2O95363 451 aaKnown RBP12.76□□□□□ -0.37
HDAC6-204ENST00000376643 IFNGR1P15260 489 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 AHCYP23526 432 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 APEX1P27695 318 aaKnown RBP12.76□□□□□ -0.37
HDAC6-204ENST00000376643 GLRXP35754 106 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
HDAC6-204ENST00000376643 SELENOVP59797 346 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms