RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 HCCSP53701 268 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 INSM1Q01101 510 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OPN5Q6U736 354 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RAB11FIP2Q7L804 512 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FADS6Q8N9I5 356 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR2M3Q8NG83 312 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF417Q8TAU3 575 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 THAP4Q8WY91 577 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PELI1Q96FA3 418 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CEP19Q96LK0 163 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF587Q96SQ5 575 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MNTQ99583 582 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NPAS1Q99742 590 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SLC30A2Q9BRI3 323 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 POTEKPQ9BYX7 375 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MARCH7Q9H992 704 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TBCCD1Q9NVR7 557 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PADI1Q9ULC6 663 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SDK2Q58EX2 2172 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NPIPB13A6NJU9 1138 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NPIPB4C9JG80 1138 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CASKO14936 926 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SNX4O95219 450 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CELA2AP08217 269 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF806P0C7X5 589 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CFL1P23528 166 aaKnown RBP16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TNFSF8P32971 234 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MTNR1BP49286 362 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OXA1LQ15070 435 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CDK5R1Q15078 307 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ACKR1Q16570 336 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CCDC58Q4VC31 144 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TP53I3Q53FA7 332 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF684Q5T5D7 378 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SLC6A19Q695T7 634 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 C6orf15Q6UXA7 325 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TIGD4Q8IY51 512 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 MS4A15Q8N5U1 240 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RPS4Y2Q8TD47 263 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SNX33Q8WV41 574 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ASB15Q8WXK1 588 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SMIM19Q96E16 107 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 COX4I2Q96KJ9 171 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TSSK2Q96PF2 358 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FAIMQ9NVQ4 179 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 VSX1Q9NZR4 365 aaPredicted RBP16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 VDAC3Q9Y277 283 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CMAHPQ9Y471 501 aa16.24■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NSG1A0A0A6YYJ2 146 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 C11orf98E9PRG8 122 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DCTN6O00399 190 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 XKRYO14609 159 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR6A2O95222 327 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TGM4P49221 684 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RPL22L1Q6P5R6 122 aaKnown RBP16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 LYPD4Q6UWN0 246 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OR6V1Q8N148 313 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 NTNG2Q96CW9 530 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SPRY4Q9C004 299 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TRAPPC4Q9Y296 219 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FKBP7Q9Y680 259 aa16.23■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SHISA3A0PJX4 238 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PRSS37A4D1T9 235 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 H7C1C5 153 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ARHGEF9O43307 516 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 GALR2O43603 387 aaPredicted RBP16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ACVR1BP36896 505 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CENPAP49450 140 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 LCN6P62502 163 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SIRPAP78324 504 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SLC3A1Q07837 685 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ATP1A4Q13733 1029 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 INSL4Q14641 139 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SF3A2Q15428 464 aaKnown RBP16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 C11orf91Q3C1V1 193 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PXKQ7Z7A4 578 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CDC20BQ86Y33 519 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TEX19Q8NA77 164 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ZNF511Q8NB15 262 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 ABHD4Q8TB40 342 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 POC1BQ8TC44 478 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 HAVCR2Q8TDQ0 301 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 DNAJA3Q96EY1 480 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 CCDC32Q9BV29 185 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SYT4Q9H2B2 425 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FANCFQ9NPI8 374 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FAM86C1Q9NVL1 165 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 TCFL5Q9UL49 500 aa16.22■□□□□ 0.19
HLA-DQB1-201ENST00000374943 FAM171A2A8MVW0 826 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SERPINA3P01011 423 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OCM2P0CE71 109 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 OCMP0CE72 109 aaPredicted RBP16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 AHCYP23526 432 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SSR4P51571 173 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PUDPQ08623 228 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 RPTNQ6XPR3 784 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 H1FNTQ75WM6 255 aaPredicted RBP16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 PPP1R32Q7Z5V6 425 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 KCTD20Q7Z5Y7 419 aa16.21■□□□□ 0.19
HLA-DQB1-201ENST00000374943 SNX29P2Q8IUI4 249 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms