RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 TRBV11-1A0A0K0K1C0 115 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 C11orf98E9PRG8 122 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 H7C1C5 153 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 DCTN6O00399 190 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 ARHGEF9O43307 516 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 ZNF354AO60765 605 aaPredicted RBP12.12□□□□□ -0.47
CSTF2-201ENST00000372972 ELK1P19419 428 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 GRPRP30550 384 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 THBS2P35442 1172 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 RPS11P62280 158 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSTF2-201ENST00000372972 LCN6P62502 163 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 P2RY14Q15391 338 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 CLPPQ16740 277 aaPredicted RBP12.12□□□□□ -0.47
CSTF2-201ENST00000372972 EEF1A1P5Q5VTE0 462 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 C5orf46Q6UWT4 87 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 UNQ9370/PRO34162Q6UXP9 181 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 LRRC28Q86X40 367 aaPredicted RBP12.12□□□□□ -0.47
CSTF2-201ENST00000372972 CHAC2Q8WUX2 184 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 PHYHIPQ92561 330 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 DNAJA3Q96EY1 480 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 NEDD4LQ96PU5 975 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 SPSB2Q99619 263 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 CRB3Q9BUF7 120 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 SLC26A1Q9H2B4 701 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 INIPQ9NRY2 104 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 CYSLTR2Q9NS75 346 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 OCIAD1Q9NX40 245 aa12.12□□□□□ -0.47
CSTF2-201ENST00000372972 ANKUB1A6NFN9 424 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 TMEM200CA6NKL6 621 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 MEN1O00255 615 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 XKRYO14609 159 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 OR2T1O43869 369 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 TRIM3O75382 744 aaPredicted RBP12.11□□□□□ -0.47
CSTF2-201ENST00000372972 DXOO77932 396 aaKnown RBP12.11□□□□□ -0.47
CSTF2-201ENST00000372972 HLA-DQB1P01920 261 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 UCHL1P09936 223 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 PRKCAP17252 672 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 EIF2B2P49770 351 aaKnown RBP12.11□□□□□ -0.47
CSTF2-201ENST00000372972 IL11RAQ14626 422 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 CARTPTQ16568 116 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 TRIQKQ629K1 86 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 OR5M10Q6IEU7 315 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 LCN10Q6JVE6 187 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 CDC20BQ86Y33 519 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 C19orf18Q8NEA5 215 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 RPS4Y2Q8TD47 263 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
CSTF2-201ENST00000372972 HGDQ93099 445 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 MNTQ99583 582 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 PDCD1LG2Q9BQ51 273 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 MFRPQ9BY79 579 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 C11orf54Q9H0W9 315 aaPredicted RBP12.11□□□□□ -0.47
CSTF2-201ENST00000372972 SYT4Q9H2B2 425 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 SACM1LQ9NTJ5 587 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 C19orf25Q9UFG5 118 aaPredicted RBP12.11□□□□□ -0.47
CSTF2-201ENST00000372972 SPEGQ15772 3267 aa12.11□□□□□ -0.47
CSTF2-201ENST00000372972 A0A1W2PPK0 400 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 C2orf72A6NCS6 295 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 PSMD9O00233 223 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 NTN3O00634 580 aaPredicted RBP12.1□□□□□ -0.47
CSTF2-201ENST00000372972 PLA2G10O15496 165 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 OR6A2O95222 327 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 AHSA1O95433 338 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 FGF5P12034 268 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 AHCYP23526 432 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 TALDO1P37837 337 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 OR2B6P58173 313 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 RPL27P61353 136 aaKnown RBP12.1□□□□□ -0.47
CSTF2-201ENST00000372972 TMEM205Q6UW68 189 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 TRILQ7L0X0 811 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 AKAP14Q86UN6 197 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 RAB43Q86YS6 212 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 HAVCR2Q8TDQ0 301 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ST8SIA1Q92185 356 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 TTC9Q92623 222 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ZCCHC4Q9H5U6 513 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 EXTL2Q9UBQ6 330 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 LAMP5Q9UJQ1 280 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ZNF281Q9Y2X9 895 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 MPDZO75970 2070 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 TVP23AA6NH52 213 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 NOTOA8MTQ0 251 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 PRR32B1ATL7 298 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ZNF879B4DU55 563 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 D6RAR5 112 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 FLRT2O43155 660 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ZFAND5O76080 213 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 CYC1P08574 325 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 NPR2P20594 1047 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 SUMO3P55854 103 aaPredicted RBP12.1□□□□□ -0.47
CSTF2-201ENST00000372972 MRPL28Q13084 256 aaKnown RBP12.1□□□□□ -0.47
CSTF2-201ENST00000372972 SELENBP1Q13228 472 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ACKR1Q16570 336 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 SLC25A35Q3KQZ1 300 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 AGAP6Q5VW22 663 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 ZNF517Q6ZMY9 492 aaPredicted RBP12.1□□□□□ -0.47
CSTF2-201ENST00000372972 FAM220AQ7Z4H9 259 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 PM20D2Q8IYS1 436 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 SAMD12Q8N8I0 201 aa12.1□□□□□ -0.47
CSTF2-201ENST00000372972 OR6S1Q8NH40 331 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms