RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 RBBP9O75884 186 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 OR8G3PP0DMU2 310 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 CPMP14384 443 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 RPS4Y1P22090 263 aaKnown RBP13.53□□□□□ -0.24
COL9A2-202ENST00000372748 LGALS3BPQ08380 585 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 RUNX2Q13950 521 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TSSK4Q6SA08 328 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF511Q8NB15 262 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 OR10K1Q8NGX5 313 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 MIB2Q96AX9 1013 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 TSSK2Q96PF2 358 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 SLC7A5P2Q9GIP4 190 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 DPP7Q9UHL4 492 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 SLC17A4Q9Y2C5 497 aa13.53□□□□□ -0.24
COL9A2-202ENST00000372748 KNL1Q8NG31 2342 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 RAB40ALP0C0E4 278 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 C5AR1P21730 350 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 EMDP50402 254 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 GLB1L2Q8IW92 636 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 DND1Q8IYX4 353 aaKnown RBP13.52□□□□□ -0.24
COL9A2-202ENST00000372748 LSM14AQ8ND56 463 aaKnown RBP13.52□□□□□ -0.24
COL9A2-202ENST00000372748 RAB40AQ8WXH6 277 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 UTP23Q9BRU9 249 aaKnown RBP13.52□□□□□ -0.24
COL9A2-202ENST00000372748 APOOQ9BUR5 198 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 KCNK15Q9H427 330 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 IGFLR1Q9H665 355 aa13.52□□□□□ -0.24
COL9A2-202ENST00000372748 ZNF230Q9UIE0 474 aaPredicted RBP13.52□□□□□ -0.24
COL9A2-202ENST00000372748 POM121BA6NF01 834 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 GPRIN2O60269 458 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 SPI1P17947 270 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 DIO1P49895 249 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 RPS21P63220 83 aaKnown RBP13.52□□□□□ -0.25
COL9A2-202ENST00000372748 ZNF425Q6IV72 752 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 LRRN1Q6UXK5 716 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 CLRN3Q8NCR9 226 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 PXT1Q8NFP0 134 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 DUSP19Q8WTR2 217 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 SLC25A28Q96A46 364 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 PELOQ9BRX2 385 aaKnown RBP13.52□□□□□ -0.25
COL9A2-202ENST00000372748 PBX4Q9BYU1 374 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 HPF1Q9NWY4 346 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 TAS2R3Q9NYW6 316 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 SERTAD3Q9UJW9 196 aa13.52□□□□□ -0.25
COL9A2-202ENST00000372748 H0Y8X5 98 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 RAB3AP20336 220 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 EFNB2P52799 333 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 GMFBP60983 142 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 ERVK-25P63136 954 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 LTBQ06643 244 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 SHEQ5VZ18 495 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 FAM109BQ6ICB4 259 aaPredicted RBP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 C19orf53Q9UNZ5 99 aaPredicted RBP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 TRAV8-7A0A075B6U6 113 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 P2RX6O15547 441 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 CTNSO60931 367 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 GLSO94925 669 aaPredicted RBP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 NDUFB2O95178 105 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 WDPCPO95876 746 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 EGFP01133 1207 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 MPGP29372 298 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 MECP2P51608 486 aaKnown RBP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 AKR1D1P51857 326 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 ILF3Q12906 894 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 BEX5Q5H9J7 111 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 PRSS41Q7RTY9 318 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 YAF2Q8IY57 180 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 GAL3ST3Q96A11 431 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 RNF166Q96A37 237 aaPredicted RBP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 GAL3ST1Q99999 423 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 RPP25Q9BUL9 199 aaKnown RBP13.51□□□□□ -0.25
COL9A2-202ENST00000372748 SLC6A15Q9H2J7 730 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 KLF15Q9UIH9 416 aa13.51□□□□□ -0.25
COL9A2-202ENST00000372748 TMEM72A0PK05 275 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 ADH1BP00325 375 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 APODP05090 189 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 CA3P07451 260 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 GTF2F2P13984 249 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 RPS27P42677 84 aaKnown RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 TSFMP43897 325 aaKnown RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 MRPS10P82664 201 aaKnown RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 MC2RQ01718 297 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 GPM6BQ13491 265 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 FBXO42Q6P3S6 717 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 NPEPL1Q8NDH3 523 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 TMEM52Q8NDY8 209 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 OR10AC1Q8NH08 325 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 ATOH1Q92858 354 aaPredicted RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 EXO5Q9H790 373 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 FGF17O60258 216 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 PRAMEF2O60811 474 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 CDC123O75794 336 aaPredicted RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 ANXA2P07355 339 aaKnown RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 FBXO45P0C2W1 286 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 CT62P0C5K7 136 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 RPL35P42766 123 aaKnown RBP13.5□□□□□ -0.25
COL9A2-202ENST00000372748 RIPPLY1Q0D2K3 151 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 ENPP7Q6UWV6 458 aa13.5□□□□□ -0.25
COL9A2-202ENST00000372748 C7orf61Q8IZ16 206 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms