RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 PPP6CO00743 305 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 THBS2P35442 1172 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 PGFP49763 221 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 PPP2CBP62714 309 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 UBE2NLQ5JXB2 153 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 METRNLQ641Q3 311 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 STEAP3Q658P3 488 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 NRARPQ7Z6K4 114 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 DHRS9Q9BPW9 319 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 SLC25A18Q9H1K4 315 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 UGT2A1Q9Y4X1 527 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 CITO14578 2027 aa12.33□□□□□ -0.43
RAPGEF1-201ENST00000372189 ANKRD34BA5PLL1 514 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR5K3A6NET4 321 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 SHISA7A6NL88 538 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 M0QZK8 103 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 PLRG1O43660 514 aaKnown RBP12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 GGCTO75223 188 aaKnown RBP12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 ITGB8P26012 769 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 CSNK1A1P48729 337 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 DPTQ07507 201 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 CCNJQ5T5M9 372 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLCO4C1Q6ZQN7 724 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 MEPCEQ7L2J0 689 aaKnown RBP12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR51T1Q8NGJ9 327 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM9BQ9NQ34 198 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 OLAHQ9NV23 265 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 BABAM2Q9NXR7 383 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 MMACHCQ9Y4U1 282 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 TP53P04637 393 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 LILRA2Q8N149 483 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 RAB3CQ96E17 227 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 ENKD1Q9H0I2 346 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 ATP13A2Q9NQ11 1180 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 A0A1B0GX78 115 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 KNG1P01042 644 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC6A19Q695T7 634 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR5M10Q6IEU7 315 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 CYB561A3Q8NBI2 242 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR51L1Q8NGJ5 315 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 FRS3O43559 492 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF17P17021 662 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 ADIRFQ15847 76 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 LILRB2Q8N423 598 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZADH2Q8N4Q0 377 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 GIMAP1Q8WWP7 306 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 C4orf36Q96KX1 117 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM100Q9NV29 134 aa12.33□□□□□ -0.44
RAPGEF1-201ENST00000372189 GABRPO00591 440 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 GAAP10253 952 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 PODNL1Q6PEZ8 512 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 LINC00696Q6ZRV3 163 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 BAGE3Q86Y29 109 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 BAGE2Q86Y30 109 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 PAQR8Q8TEZ7 354 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 EDEM2Q9BV94 578 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 IL21Q9HBE4 155 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 RAB22AQ9UL26 194 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 PRELID3BQ9Y3B1 194 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 KLK4Q9Y5K2 254 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 B3GALT1Q9Y5Z6 326 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM202A6NGA9 273 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 M0R143 59 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 OPN1LWP04000 364 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 GABRA5P31644 462 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 SLC5A12Q1EHB4 618 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 PIP5KL1Q5T9C9 394 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 FAM122BQ7Z309 247 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 FCRL1Q96LA6 429 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 UBXN10Q96LJ8 280 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 TSPAN10Q9H1Z9 355 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 IER3IP1Q9Y5U9 82 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 GAPDHSO14556 408 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 HSBP1O75506 76 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 LCATP04180 440 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 SMN1Q16637 294 aaKnown RBP12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 C11orf91Q3C1V1 193 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 KCTD12Q96CX2 325 aaKnown RBP12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 INIPQ9NRY2 104 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 P2RX6O15547 441 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 RAB40ALP0C0E4 278 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 ZNF585AQ6P3V2 769 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 TMEM178AQ8NBL3 297 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR56B4Q8NH76 319 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 RAB40AQ8WXH6 277 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 CPPED1Q9BRF8 314 aaPredicted RBP12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 PSORS1C1Q9UIG5 152 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 TCF21O43680 179 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 BMI1P35226 326 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 AKR1C2P52895 323 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 GPR50Q13585 617 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 MLC1Q15049 377 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 TSSK4Q6SA08 328 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 DHRS11Q6UWP2 260 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 SERPINA12Q8IW75 414 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 ARSGQ96EG1 525 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 OR10A5Q9H207 317 aa12.32□□□□□ -0.44
RAPGEF1-201ENST00000372189 A0A1W2PPC4 97 aa12.31□□□□□ -0.44
RAPGEF1-201ENST00000372189 SEC14L2O76054 403 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms