RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 SYT9Q86SS6 491 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 OR56B4Q8NH76 319 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 PIGQQ9BRB3 760 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 AMBRA1Q9C0C7 1298 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 C12orf49Q9H741 205 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 SNX11Q9Y5W9 270 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 MYOGP15173 224 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 PFN3P60673 137 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 OR8B8Q15620 311 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 NHSL2Q5HYW2 709 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 ZBP1Q9H171 429 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.47■□□□□ 0.872e-9■■□□□ 14.4
TM9SF3-201ENST00000371142 SPHK1Q9NYA1 384 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 KDM3BQ7LBC6 1761 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 CCL11P51671 97 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 MAVSQ7Z434 540 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 OR13H1Q8NG92 308 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 OR5M1Q8NGP8 315 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 OR4A16Q8NH70 328 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 FGGYQ96C11 551 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 NEURL3Q96EH8 262 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 ZBED3Q96IU2 234 aaPredicted RBP20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 OR5M11Q96RB7 305 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 MYOTQ9UBF9 498 aa20.47■□□□□ 0.87
TM9SF3-201ENST00000371142 HIST2H3PS2Q5TEC6 136 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 SLC46A1Q96NT5 459 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 DUSP13Q9UII6 198 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 AKR1C1Q04828 323 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 ATPAF1Q5TC12 328 aaPredicted RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 LILRA2Q8N149 483 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 PIGTQ969N2 578 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 NGBQ9NPG2 151 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 LHX6Q9UPM6 363 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 SELENOFO60613 162 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 ADAM23O75077 832 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 M6PRP20645 277 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 SLC48A1Q6P1K1 146 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 C5orf46Q6UWT4 87 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 ZNF511Q8NB15 262 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 ST7LQ8TDW4 575 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 TCEAL2Q9H3H9 227 aaPredicted RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 TXNL1O43396 289 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 RPA2P15927 270 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 EN2P19622 333 aaPredicted RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 GABREP78334 506 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 LRRC26Q2I0M4 334 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 DPY19L2P2Q6ZN68 376 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 ZFP82Q8N141 532 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 PFN4Q8NHR9 129 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 H1FXQ92522 213 aaKnown RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 SLC19A3Q9BZV2 496 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 HIPK2Q9H2X6 1198 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 GFOD1Q9NXC2 390 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 RPS10-NUDT3A0A1W2PQS6 291 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 TMEM11P17152 192 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 RPS10P46783 165 aaKnown RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 TGM4P49221 684 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 CSNK1G2P78368 415 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 CAMK2BQ13554 666 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 ALKBH1Q13686 389 aaKnown RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 KCNJ8Q15842 424 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 KCNIP4Q6PIL6 250 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 WFDC5Q8TCV5 224 aa20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 PCNPQ8WW12 178 aaKnown RBP20.46■□□□□ 0.87
TM9SF3-201ENST00000371142 M0QYG6 137 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 HTR1FP30939 366 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 DECR2Q9NUI1 292 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 RAB27BO00194 218 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 SULT1B1O43704 296 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 TSSK2Q96PF2 358 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 NXPH2O95156 264 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC35E2P0CK97 266 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 CR2P20023 1033 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 SNCAP37840 140 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 TMPRSS7Q7RTY8 843 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 NRSN2Q9GZP1 204 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 IGHV3-20A0A0C4DH32 117 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF749O43361 778 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 MLF2Q15773 248 aaPredicted RBP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 MEP1BQ16820 701 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 YIF1BQ5BJH7 314 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF454Q8N9F8 522 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 TMEM102Q8N9M5 508 aaPredicted RBP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 OR1J2Q8NGS2 313 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 FCRL1Q96LA6 429 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 ZMAT3Q9HA38 289 aaKnown RBP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 PCDHGA5Q9Y5G8 931 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 PUS1Q9Y606 427 aaKnown RBP eCLIP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 PTCRAQ6ISU1 281 aaPredicted RBP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 SLC22A25Q6T423 547 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 KCNG3Q8TAE7 436 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 FAM213BQ8TBF2 198 aa20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 DCLRE1CQ96SD1 692 aaKnown RBP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 THAP10Q9P2Z0 257 aaPredicted RBP20.45■□□□□ 0.86
TM9SF3-201ENST00000371142 C17orf112F2Z3M2 114 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 CLDN1O95832 211 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 PPP3CBP16298 524 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 CASP3P42574 277 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 UBE2KP61086 200 aa20.44■□□□□ 0.86
TM9SF3-201ENST00000371142 ZNF813Q6ZN06 617 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms