RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 CTHRC1Q96CG8 243 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 CITED4Q96RK1 184 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 GAL3ST4Q96RP7 486 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 BARHL1Q9BZE3 327 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 POLR2J2Q9GZM3 115 aaKnown RBP13.47□□□□□ -0.25
LMO4-201ENST00000370542 OR10A5Q9H207 317 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 MMP28Q9H239 520 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 LDAHQ9H6V9 325 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 EMC7Q9NPA0 242 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 TIGARQ9NQ88 270 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 DIMT1Q9UNQ2 313 aaKnown RBP13.47□□□□□ -0.25
LMO4-201ENST00000370542 ANGPT4Q9Y264 503 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 BOLA1Q9Y3E2 137 aa13.47□□□□□ -0.25
LMO4-201ENST00000370542 DSPPQ9NZW4 1301 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 A0A0G2JMP0 313 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 FAM240BA0A1B0GVZ2 78 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 C1orf226A1L170 272 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 A8MV72 311 aaPredicted RBP13.46□□□□□ -0.25
LMO4-201ENST00000370542 LEUTXA8MZ59 168 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 AHRRA9YTQ3 701 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 TP53I11O14683 189 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 PRKYO43930 277 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 CDRT1O95170 752 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 ATP1B1P05026 303 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 SLC2A2P11168 524 aaPredicted RBP13.46□□□□□ -0.25
LMO4-201ENST00000370542 CPMP14384 443 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 NAGAP17050 411 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 GALP22466 123 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 FGF9P31371 208 aaPredicted RBP13.46□□□□□ -0.25
LMO4-201ENST00000370542 CEACAM8P31997 349 aaPredicted RBP13.46□□□□□ -0.25
LMO4-201ENST00000370542 ART1P52961 327 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 CRYZQ08257 329 aaKnown RBP13.46□□□□□ -0.25
LMO4-201ENST00000370542 TMEM44Q2T9K0 475 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 PRICKLE4Q2TBC4 344 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 Q5BKY6 102 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 SLC48A1Q6P1K1 146 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 POMZP3Q6PJE2 187 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 KIF18BQ86Y91 864 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 GRAMD2AQ8IUY3 354 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 NUDT8Q8WV74 236 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 DCLRE1CQ96SD1 692 aaKnown RBP13.46□□□□□ -0.25
LMO4-201ENST00000370542 SOSTQ9BQB4 213 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 AMBNQ9NP70 447 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 ABCB9Q9NP78 766 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 TAS2R7Q9NYW3 318 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 GLTPQ9NZD2 209 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 VPS29Q9UBQ0 182 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 B4GALT7Q9UBV7 327 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 ALG5Q9Y673 324 aa13.46□□□□□ -0.25
LMO4-201ENST00000370542 A0A1W2PQL4 384 aaPredicted RBP13.45□□□□□ -0.26
LMO4-201ENST00000370542 RAB36O95755 333 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 EPPINO95925 133 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 HK1P19367 917 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 GPC1P35052 558 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 TIMP3P35625 211 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 FBXW4P57775 412 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 ACSM2AQ08AH3 577 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 COX10Q12887 443 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 DUSP8Q13202 625 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 FBXL19-AS1Q494R0 122 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 SPIN4Q56A73 249 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 ZBTB37Q5TC79 503 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 ACSM2BQ68CK6 577 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 C12orf73Q69YU5 71 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 VASNQ6EMK4 673 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 IKBIPQ70UQ0 350 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 COMMD6Q7Z4G1 85 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 LUZP2Q86TE4 346 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 NATD1Q8N6N6 113 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 LRRC17Q8N6Y2 441 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 TOR1AIP2Q8NFQ8 470 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 SPATA3Q8NHX4 192 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 DIO2Q92813 273 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 TM4SF18Q96CE8 201 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 OMA1Q96E52 524 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 TMEM41AQ96HV5 264 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 ZNF681Q96N22 645 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 TIMP4Q99727 224 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 PRDM14Q9GZV8 571 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 SLC6A15Q9H2J7 730 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 MIXL1Q9H2W2 232 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 PRM3Q9NNZ6 103 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 TXNL4BQ9NX01 149 aaKnown RBP13.45□□□□□ -0.26
LMO4-201ENST00000370542 ATP6V1HQ9UI12 483 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 DTX4Q9Y2E6 619 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 EXOSC1Q9Y3B2 195 aaKnown RBP13.45□□□□□ -0.26
LMO4-201ENST00000370542 AKAP6Q13023 2319 aa13.45□□□□□ -0.26
LMO4-201ENST00000370542 NBEAL1Q6ZS30 2694 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 SYT5O00445 386 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 FAAHO00519 579 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 PLA2G10O15496 165 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 LYRM1O43325 122 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 SLC22A5O76082 557 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 DHFRP00374 187 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 IFNA7P01567 189 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 IFNW1P05000 195 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 PSKH1P11801 424 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 CTRB1P17538 263 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 ABCD3P28288 659 aa13.44□□□□□ -0.26
LMO4-201ENST00000370542 ATP12AP54707 1039 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms