RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 FAM46AQ96IP4 442 aaKnown RBP12.18□□□□□ -0.46
SSR4-202ENST00000370085 MED18Q9BUE0 208 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 ASH1LQ9NR48 2969 aaKnown RBP12.18□□□□□ -0.46
SSR4-202ENST00000370085 CCM2LQ9NUG4 571 aaPredicted RBP12.18□□□□□ -0.46
SSR4-202ENST00000370085 ZNF226Q9NYT6 803 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 TAS2R16Q9NYV7 291 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 TAS2R5Q9NYW4 299 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 KCNN3Q9UGI6 736 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 HIF3AQ9Y2N7 669 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 LYVE1Q9Y5Y7 322 aa12.18□□□□□ -0.46
SSR4-202ENST00000370085 CIB4A0PJX0 185 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 NPIPB13A6NJU9 1138 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 NPIPB4C9JG80 1138 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 C19orf84I3L1E1 186 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 TRAF3IP2O43734 574 aaPredicted RBP12.17□□□□□ -0.46
SSR4-202ENST00000370085 FKBP6O75344 327 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 DEAF1O75398 565 aaPredicted RBP12.17□□□□□ -0.46
SSR4-202ENST00000370085 E2F6O75461 281 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 CCNB2O95067 398 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 HPRP00739 348 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 FCGR1AP12314 374 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 IFNGR1P15260 489 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 MAKP20794 623 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 HOXC12P31275 282 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 RPL4P36578 427 aaKnown RBP12.17□□□□□ -0.46
SSR4-202ENST00000370085 SELENOPP49908 381 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 RPL18Q07020 188 aaKnown RBP12.17□□□□□ -0.46
SSR4-202ENST00000370085 ZBED5Q49AG3 693 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 SFRP5Q5T4F7 317 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 OR7E24Q6IFN5 339 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 HMBOX1Q6NT76 420 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 CXorf67Q86X51 503 aaPredicted RBP12.17□□□□□ -0.46
SSR4-202ENST00000370085 OR51A7Q8NH64 312 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 GNPDA2Q8TDQ7 276 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 FAM222BQ8WU58 562 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 LRR1Q96L50 414 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 DACH2Q96NX9 599 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 LINC00470Q9BZP3 86 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 PRSS50Q9UI38 385 aa12.17□□□□□ -0.46
SSR4-202ENST00000370085 SH3D21A4FU49 640 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 SLC35F4A4IF30 521 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 UNC119BA6NIH7 251 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 CLOCKO15516 846 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 ENTPD5O75356 428 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 GOSR1O95249 250 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 IGHV3-9P01782 118 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 IGHG1P01857 330 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 TSPAN19P0C672 248 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 MPGP29372 298 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
SSR4-202ENST00000370085 AQP2P41181 271 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 SH3BGRP55822 239 aaPredicted RBP12.16□□□□□ -0.46
SSR4-202ENST00000370085 BIDP55957 195 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 RPS4XP62701 263 aaKnown RBP12.16□□□□□ -0.46
SSR4-202ENST00000370085 SEC23BQ15437 767 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 C1QTNF12Q5T7M4 302 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 TSPO2Q5TGU0 170 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 FAM205BPQ63HN1 556 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 RPL13AP3Q6NVV1 102 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 STAC2Q6ZMT1 411 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
SSR4-202ENST00000370085 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.16□□□□□ -0.46
SSR4-202ENST00000370085 P2RY8Q86VZ1 359 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 PAPD5Q8NDF8 572 aaKnown RBP12.16□□□□□ -0.46
SSR4-202ENST00000370085 OR6N1Q8NGY5 312 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 OR6X1Q8NH79 312 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 ZNF566Q969W8 418 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 OR2M2Q96R28 347 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 FUZQ9BT04 418 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 ACTR6Q9GZN1 396 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 NGBQ9NPG2 151 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 SLC7A10Q9NS82 523 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 DNAJB9Q9UBS3 223 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 AP4S1Q9Y587 144 aa12.16□□□□□ -0.46
SSR4-202ENST00000370085 TRAV27A0A087WT01 109 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 A6NIZ1 184 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 CENPBD1B2RD01 187 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 LYZL6O75951 148 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 ZNF432O94892 652 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 NDUFB2O95178 105 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 F13BP05160 661 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 EPXP11678 715 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 HLA-DOBP13765 273 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 COX5AP20674 150 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 GSTM3P21266 225 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 FPR3P25089 353 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 COL8A1P27658 744 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 OMPP47874 163 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 LIMS1P48059 325 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 CSNK1A1P48729 337 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 ERFP50548 548 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 CLRN1P58418 232 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 RAP1BP61224 184 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 RAP1AP62834 184 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 LAPTM4AQ15012 233 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 MICAQ29983 383 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 KLHL24Q6TFL4 600 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 LSRQ86X29 649 aaPredicted RBP12.15□□□□□ -0.46
SSR4-202ENST00000370085 ACBD4Q8NC06 268 aa12.15□□□□□ -0.46
SSR4-202ENST00000370085 C1orf162Q8NEQ5 155 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms