RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 CHRDL1Q9BU40 450 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ROGDIQ9GZN7 287 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 NIPAL2Q9H841 368 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ADAP2Q9NPF8 381 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 CALYQ9NYX4 217 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 COX16Q9P0S2 106 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 CTNNA3Q9UI47 895 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 KLK12Q9UKR0 248 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 RAB26Q9ULW5 256 aa2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ZNFX1Q9P2E3 1918 aaKnown RBP2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 TET2Q6N021 2002 aaPredicted RBP2.22□□□□□ -2.05
ECHDC1-201ENST00000368287 ASTN1O14525 1302 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 SYNJ2BP-COX16A0A087WUM0 186 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 A0A0G2JN53 185 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 A6NDX4 124 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 PCP4L1A6NKN8 68 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 TMEM50AO95807 157 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 RPS2P15880 293 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 ABOP16442 354 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 TBPP20226 339 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 CCNCP24863 283 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 NPBWR2P48146 333 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 FGF8P55075 233 aaPredicted RBP2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 CDH4P55283 916 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 ENPEPQ07075 957 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 FZD2Q14332 565 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 CYTH1Q15438 398 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 KCTD21Q4G0X4 260 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 CYB5R2Q6BCY4 276 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 TRIM40Q6P9F5 258 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 EGFL6Q8IUX8 553 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC22A9Q8IVM8 553 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 PUSL1Q8N0Z8 303 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 ZADH2Q8N4Q0 377 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 Q8N9W7 124 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 NPBQ8NG41 125 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 BLOC1S5Q8TDH9 187 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 PYROXD1Q8WU10 500 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 OR8B4Q96RC9 309 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 NRIP2Q9BQI9 281 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 RIOK2Q9BVS4 552 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 GBA3Q9H227 469 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 UGT1A7Q9HAW7 530 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 UGT1A10Q9HAW8 530 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 UGT1A8Q9HAW9 530 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 ZFP14Q9HCL3 533 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 SPATA7Q9P0W8 599 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 NUFIP1Q9UHK0 495 aaKnown RBP2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC25A15Q9Y619 301 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 NPTNQ9Y639 398 aa2.21□□□□□ -2.06
ECHDC1-201ENST00000368287 IGLV3-16A0A075B6K0 115 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 ERVV-1B6SEH8 477 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 UPK3AO75631 287 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 SNX4O95219 450 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 IGHV2-5P01817 119 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 UQCRFS1P1P0C7P4 283 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 TOP1P11387 765 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 NCF2P19878 526 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 MX1P20591 662 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 KITLGP21583 273 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 FDFT1P37268 417 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 CCR6P51684 374 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 SH3BGRP55822 239 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 ACTR3P61158 418 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 RPL23AP62750 156 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 LRRC63Q05C16 580 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 MRPL28Q13084 256 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 IMMTQ16891 758 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 RSPO1Q2MKA7 263 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 PRAMEF5Q5TYX0 476 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 AGBL2Q5U5Z8 902 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 PRAMEF6Q5VXH4 476 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 Q6P435 159 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 CNIH2Q6PI25 160 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 KDM7AQ6ZMT4 941 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 SLC25A48Q6ZT89 311 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 NBPF5PQ86XG9 351 aaPredicted RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 ARIH2OSQ8N7S6 290 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 FNDC5Q8NAU1 212 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 TRPV1Q8NER1 839 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 OR4F15Q8NGB8 312 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 OR4F6Q8NGB9 312 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 AKR7LQ8NHP1 331 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 FAM104AQ969W3 186 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 TMEM59Q9BXS4 323 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 CLMPQ9H6B4 373 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 NT5MQ9NPB1 228 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 SLCO1B3Q9NPD5 702 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 DEC1Q9P2X7 70 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 XCL2Q9UBD3 114 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 RABL2BQ9UNT1 228 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 PEX16Q9Y5Y5 336 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 F11RQ9Y624 299 aaKnown RBP2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 PIKFYVEQ9Y2I7 2098 aa2.2□□□□□ -2.06
ECHDC1-201ENST00000368287 CDHR2Q9BYE9 1310 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 PPIAL4EA0A075B759 164 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 TRBV6-6A0A0A6YYG2 114 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 FAM240BA0A1B0GVZ2 78 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 FAM166BA8MTA8 275 aa2.19□□□□□ -2.06
ECHDC1-201ENST00000368287 C12orf71A8MTZ7 269 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms