RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 MEOX2P50222 304 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 LIM2P55344 173 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 SPOCK1Q08629 439 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 IRF3Q14653 427 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 MRPL2Q5T653 305 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 H3F3CQ6NXT2 135 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF561Q8N587 486 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF439Q8NDP4 499 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR4F15Q8NGB8 312 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR13C3Q8NGS6 347 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR5H2Q8NGV7 314 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ABHD4Q8TB40 342 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 VN1R3Q9BXE9 311 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 FBXL2Q9UKC9 423 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 RLFQ13129 1914 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 C20orf202A1L168 122 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 TUBAL3A6NHL2 446 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 NUDT19A8MXV4 375 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 SEMA4FO95754 770 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 PTBP3O95758 552 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 CD3GP09693 182 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 PBX2P40425 430 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 RPS25P62851 125 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 HTR4Q13639 388 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM180BQ6P0A1 224 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 DPY19L2P2Q6ZN68 376 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 MAMDC2Q7Z304 686 aaPredicted RBP4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR4N5Q8IXE1 308 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 TSTD1Q8NFU3 115 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR56B4Q8NH76 319 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAB3CQ96E17 227 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 COX14Q96I36 57 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 CMTM3Q96MX0 182 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZSWIM8A7E2V4 1837 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 FZD7O75084 574 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 B3GALT4O96024 378 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 SYPP08247 313 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 CRABP1P29762 137 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 RIDAP52758 137 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 CTXN1P60606 82 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 TSSK4Q6SA08 328 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF620Q6ZNG0 422 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 SKA3Q8IX90 412 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 OIT3Q8WWZ8 545 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 TGM7Q96PF1 710 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 RBP7Q96R05 134 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 SDF2Q99470 211 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 NXF2Q9GZY0 626 aaKnown RBP4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 FN3KRPQ9HA64 309 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 CLEC2DQ9UHP7 191 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 KPTNQ9Y664 436 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 A0A1W2PR48 441 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 UBL3O95164 117 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 HCCSP53701 268 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAP1AP62834 184 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ACSM5Q6NUN0 579 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 LIX1LQ8IVB5 337 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 ADAM19Q9H013 955 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 CERS4Q9HA82 394 aa4.96□□□□□ -1.62
CDC42BPA-204ENST00000366767 TRAV18A0A075B6X5 111 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 LINC01553A4QN01 128 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 RNF212BA8MTL3 300 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 GRXCR1A8MXD5 290 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 KCNK2O95069 426 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 ID2Q02363 134 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 UBE2NLQ5JXB2 153 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 LEG1Q6P5S2 330 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 UNQ6126/PRO20091Q6UXV3 157 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TTLL10Q6ZVT0 673 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 RBM45Q8IUH3 476 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 C1orf87Q8N0U7 546 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM58AQ8N1B3 248 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SYS1Q8N2H4 156 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR4D10Q8NGI6 311 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 HMGB4Q8WW32 186 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TOLLIPQ9H0E2 274 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 SPNS1Q9H2V7 528 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TAS2R16Q9NYV7 291 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 C19orf25Q9UFG5 118 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 KLF15Q9UIH9 416 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 PURGQ9UJV8 347 aaKnown RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CAMK2AQ9UQM7 478 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NPIPA5E9PKD4 350 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 TCAPO15273 167 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CDC123O75794 336 aaPredicted RBP4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAF1P04049 648 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 S1PR1P21453 382 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CCR2P41597 374 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 CD276Q5ZPR3 534 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 APOOLQ6UXV4 268 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 MOB1BQ7L9L4 216 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 P4HA3Q7Z4N8 544 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 NLGN4XQ8N0W4 816 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR6V1Q8N148 313 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR4D6Q8NGJ1 314 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR4K13Q8NH42 304 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 GPR148Q8TDV2 347 aa4.95□□□□□ -1.62
CDC42BPA-204ENST00000366767 LMX1AQ8TE12 382 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms