RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 ACTRT1Q8TDG2 376 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 PYROXD1Q8WU10 500 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 ZNF641Q96N77 438 aaPredicted RBP2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 RSPO3Q9BXY4 272 aaPredicted RBP2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 KRTAP4-3Q9BYR4 195 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 DEFB127Q9H1M4 99 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 RMND5AQ9H871 391 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 INPP5EQ9NRR6 644 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 SPATA7Q9P0W8 599 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 ZNF835Q9Y2P0 537 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 POLDIP2Q9Y2S7 368 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 DOCK9Q9BZ29 2069 aa2.03□□□□□ -2.08
RNU4-1-201ENST00000363925 PEX7O00628 323 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 SLC31A2O15432 143 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 FOXH1O75593 365 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 ERLIN2O94905 339 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 KRT8P05787 483 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 NCK1P16333 377 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 ZNF30P17039 623 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 KLRB1Q12918 225 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 FZD2Q14332 565 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 PRPSAP1Q14558 356 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 SGCAQ16586 387 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 UBE2SQ16763 222 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 CFAP157Q5JU67 520 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 ATAD3BQ5T9A4 648 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 ZSCAN25Q6NSZ9 544 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 PMF1Q6P1K2 205 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 VSTM4Q8IW00 320 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 GPATCH11Q8N954 259 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 MFSD9Q8NBP5 474 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 ZFP90Q8TF47 636 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 RLN3Q8WXF3 142 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 SMARCD2Q92925 531 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 MED8Q96G25 268 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 OXGR1Q96P68 337 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 COPS8Q99627 209 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 ADAP2Q9NPF8 381 aa2.02□□□□□ -2.09
RNU4-1-201ENST00000363925 KIF26AQ9ULI4 1882 aaPredicted RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 LRCOL1A6NCL2 159 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 HSD17B6O14756 317 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 MAGEB3O15480 346 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 ZNF208O43345 1280 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 MGRN1O60291 552 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 RAMP3O60896 148 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 RHOBTB1O94844 696 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 PTMAP06454 111 aaKnown RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 RHOXF2BP0C7M4 288 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 ZNF286BP0CG31 522 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 DBTP11182 482 aaKnown RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 PRPS2P11908 318 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 IGFBP3P17936 291 aaPredicted RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 TCN1P20061 433 aaPredicted RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 NPY1RP25929 384 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 ATP1B3P54709 279 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 FGF8P55075 233 aaPredicted RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 SCRN3Q0VDG4 424 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 AQP6Q13520 282 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 FAM83EQ2M2I3 478 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 RSPO1Q2MKA7 263 aaPredicted RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 LY6G6FQ5SQ64 297 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 C1orf220Q5T0J3 134 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 PDZK1Q5T2W1 519 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 OR4F3Q6IEY1 312 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 C19orf35Q6ZS72 473 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 MREGQ8N565 214 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 RNF182Q8N6D2 247 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 Q8N976 141 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 OR2G2Q8NGZ5 317 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 FRZBQ92765 325 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 SGK3Q96BR1 496 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 HSFY1Q96LI6 401 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 TCEANC2Q96MN5 208 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 NPAS2Q99743 824 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 CAPS2Q9BXY5 557 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 GABARAPL3Q9BY60 117 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 YY1AP1Q9H869 796 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 CTPS2Q9NRF8 586 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 EXD2Q9NVH0 621 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 ZNF222Q9UK12 451 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 CDH9Q9ULB4 789 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 MRPS7Q9Y2R9 242 aaKnown RBP2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 SLIT3O75094 1523 aa2.01□□□□□ -2.09
RNU4-1-201ENST00000363925 MSH6P52701 1360 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 GAKO14976 1311 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 H0YCG3 227 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 KMOO15229 486 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 IGLV2-23P01705 113 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 BGLAPP02818 100 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 CAPN1P07384 714 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 IQCF3P0C7M6 154 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 CALM1P0DP23 149 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 CALM2P0DP24 149 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 CALM3P0DP25 149 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 PGAM1P18669 254 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 ATP5C1P36542 298 aaKnown RBP2□□□□□ -2.09
RNU4-1-201ENST00000363925 SSR1P43307 286 aaKnown RBP2□□□□□ -2.09
RNU4-1-201ENST00000363925 CYB561P49447 251 aa2□□□□□ -2.09
RNU4-1-201ENST00000363925 SUB1P53999 127 aaKnown RBP eCLIP2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms