RNA–Protein interactions for RNA: ENST00000360524.12

CCDC144A-204, Transcript of coiled-coil domain containing 144A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC144A, Length 5,830 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-204ENST00000360524 ZFAND1Q8TCF1 268 aa11.31□□□□□ -0.6
CCDC144A-204ENST00000360524 SLC38A5Q8WUX1 472 aa11.31□□□□□ -0.6
CCDC144A-204ENST00000360524 TMEM255BQ8WV15 326 aa11.31□□□□□ -0.6
CCDC144A-204ENST00000360524 VN1R3Q9BXE9 311 aa11.31□□□□□ -0.6
CCDC144A-204ENST00000360524 NENFQ9UMX5 172 aa11.31□□□□□ -0.6
CCDC144A-204ENST00000360524 TRAV20A0A0B4J274 112 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 TUSC2O75896 110 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 APOA2P02652 100 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 PCBD1P61457 104 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 TAZQ16635 292 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 TMUB2Q71RG4 321 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 PRICKLE2Q7Z3G6 844 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 TPRA1Q86W33 373 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 PLPP5Q8NEB5 264 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 OR5D18Q8NGL1 313 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 CHTF18Q8WVB6 975 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 TNFRSF13CQ96RJ3 184 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 SLC25A31Q9H0C2 315 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 FAM234AQ9H0X4 552 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 SLC6A20Q9NP91 592 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 A0A1W2PPV4 95 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 S100A8P05109 93 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 FABP6P51161 128 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 CCR6P51684 374 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 ZNF836Q6ZNA1 936 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 MMP21Q8N119 569 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 KHSRPQ92945 711 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 OR5M11Q96RB7 305 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 TMEM72A0PK05 275 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 LPLP06858 475 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 CPT2P23786 658 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 REEP5Q00765 189 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 HSF5Q4G112 596 aaPredicted RBP11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 NIPAL3Q6P499 406 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 VRK3Q8IV63 474 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 FAM213BQ8TBF2 198 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 SPPL3Q8TCT6 385 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 NUDT8Q8WV74 236 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 SLC22A12Q96S37 553 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 MCOLN1Q9GZU1 580 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 ABLIM3O94929 683 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 PMP2P02689 132 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 CNR1P21554 472 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 NKAIN2Q5VXU1 208 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 CLDN22Q8N7P3 220 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 UBXN10Q96LJ8 280 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 NIPSNAP1Q9BPW8 284 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 CMSS1Q9BQ75 279 aaKnown RBP11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 KATNB1Q9BVA0 655 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 KIF13AQ9H1H9 1805 aa11.3□□□□□ -0.6
CCDC144A-204ENST00000360524 LINC01553A4QN01 128 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 ZNF264O43296 627 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 SIGLEC6O43699 453 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 DPM1O60762 260 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 RAB40ALP0C0E4 278 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 CLEC2LP0C7M8 214 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 ABOP16442 354 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 TAGLN2P37802 199 aaKnown RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 SRP9P49458 86 aaKnown RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 RBPJQ06330 500 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 TMEM52BQ4KMG9 183 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 NLRC3Q7RTR2 1065 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 RAB40AQ8WXH6 277 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 C22orf15Q8WYQ4 148 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 OBP2AQ9NY56 170 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 TRAPPC2LH3BP13 241 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 KCNK2O95069 426 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 OPRD1P41143 372 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 CAMK2DQ13557 499 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 FRMD1Q8N878 549 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 EDAQ92838 391 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 C20orf24Q9BUV8 137 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 ASH2LQ9UBL3 628 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 ZNF230Q9UIE0 474 aaPredicted RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 PSORS1C1Q9UIG5 152 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 H7C1Q1 480 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 TO15178 435 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 JUNBP17275 347 aaPredicted RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 CLDN17P56750 224 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 DCDP81605 110 aaKnown RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 TSPAN31Q12999 210 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 CD276Q5ZPR3 534 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 FAM160A2Q8N612 972 aaPredicted RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 ASB17Q8WXJ9 295 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 MRPL38Q96DV4 380 aaKnown RBP11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 OR6C1Q96RD1 312 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 NMNAT3Q96T66 252 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 SLC23A2Q9UGH3 650 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 SNX11Q9Y5W9 270 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 PLSCR5A0PG75 271 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 H3BNC9 293 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 M0QYG6 137 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 SCG5P05408 212 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 HCCSP53701 268 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 MAP6Q96JE9 813 aa11.29□□□□□ -0.6
CCDC144A-204ENST00000360524 PPP1R14DQ9NXH3 145 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms