RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 SEMA4CQ9C0C4 833 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ZCCHC4Q9H5U6 513 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SOX17Q9H6I2 414 aaPredicted RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 FKRPQ9H9S5 495 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 OBP2AQ9NY56 170 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 CD300AQ9UGN4 299 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 MRPS34P82930 218 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 TNFRSF17Q02223 184 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 Q6ZRG5 221 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ARPC5LQ9BPX5 153 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SULT1B1O43704 296 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 AIFM1O95831 613 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 CYC1P08574 325 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ITGB8P26012 769 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SDR9C7Q8NEX9 313 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 TMEM185AQ8NFB2 350 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SH3BGRL2Q9UJC5 107 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 NWD2Q9ULI1 1742 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 OR52A4PA6NMU1 304 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 RPS5P46782 204 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 ALKBH1Q13686 389 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 IL34Q6ZMJ4 242 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 NXF5Q9H1B4 397 aaKnown RBP8.99□□□□□ -0.97
CUX1-203ENST00000360264 HRH4Q9H3N8 390 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 ENPP1P22413 925 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 PGGHGQ32M88 737 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 OR5M10Q6IEU7 315 aa8.99□□□□□ -0.97
CUX1-203ENST00000360264 SOX4Q06945 474 aaPredicted RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 LCN10Q6JVE6 187 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ADAMTS6Q9UKP5 1117 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ST8SIA5O15466 376 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 FOXD2O60548 495 aaPredicted RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 RAB35Q15286 201 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SSX2Q16385 188 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 CLECL1Q8IZS7 167 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 TMEM82A0PJX8 343 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 RPS17P08708 135 aaKnown RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 GABRA4P48169 554 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ZNF573Q86YE8 665 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 NHLRC2Q8NBF2 726 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 CDC14CA4D256 554 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 AP1G1O43747 822 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 MAOBP27338 520 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 EVI2BP34910 448 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ACSM1Q08AH1 577 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SELPLGQ14242 412 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 DPY19L2P2Q6ZN68 376 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 WDTC1Q8N5D0 677 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ALG12Q9BV10 488 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 WDR76Q9H967 626 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 PRDM9Q9NQV7 894 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 GJD2Q9UKL4 321 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 LRRC37A3O60309 1634 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 CLDN24A6NM45 220 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ARHGAP33O14559 1287 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 PPP3CBP16298 524 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 RAB6AP20340 208 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ETV5P41161 510 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 CDKN3Q16667 212 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 LACC1Q8IV20 430 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 PDLIM5Q96HC4 596 aaKnown RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 CLMPQ9H6B4 373 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 DNMT3BQ9UBC3 853 aaKnown RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 DRGXA6NNA5 263 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 G3V2L1 256 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SLC35E2P0CK97 266 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 TCN2P20062 427 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 HTR1FP30939 366 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 RAD52P43351 418 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 MEP1BQ16820 701 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 IGFN1Q86VF2 1251 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 JAM3Q9BX67 310 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 MOB1AQ9H8S9 216 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 PRDM4Q9UKN5 801 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 FAM208BQ5VWN6 2430 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 C17orf99Q6UX52 265 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ZNF480Q8WV37 535 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SECTM1Q8WVN6 248 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 DDX31Q9H8H2 851 aaKnown RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 STARD5Q9NSY2 213 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 M0QZ24 198 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 FZD7O75084 574 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 NDUFA6P56556 154 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 CDHR3Q6ZTQ4 885 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 ATOH1Q92858 354 aaPredicted RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 KHSRPQ92945 711 aaKnown RBP eCLIP8.98□□□□□ -0.973e-7■■■■□ 19.9
CUX1-203ENST00000360264 LRFN5Q96NI6 719 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 IER2Q9BTL4 223 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 TREX1Q9NSU2 369 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 CA5AP35218 305 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 TAS2R45P59539 299 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 REEP5Q00765 189 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SHEQ5VZ18 495 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 DRAXINQ8NBI3 349 aaPredicted RBP8.98□□□□□ -0.97
CUX1-203ENST00000360264 TAS2R16Q9NYV7 291 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 HS3ST2Q9Y278 367 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SLC16A6O15403 523 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 SCGB1D1O95968 90 aa8.98□□□□□ -0.97
CUX1-203ENST00000360264 BATFQ16520 125 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms