RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 LRIG1Q96JA1 1093 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 CNTNAP3BQ96NU0 1288 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ACTRT3Q9BYD9 372 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 OR51M1Q9H341 326 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 MTHFD2LQ9H903 347 aaPredicted RBP13.65□□□□□ -0.22
UBAP1-202ENST00000359544 PRDM9Q9NQV7 894 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 PLAGL1Q9UM63 463 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 MOKQ9UQ07 419 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 SIGLEC7Q9Y286 467 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 ASF1AQ9Y294 204 aa13.65□□□□□ -0.22
UBAP1-202ENST00000359544 TBC1D3EA0A087X179 549 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 GLOD5A6NK44 160 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 GYPBP06028 91 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 CSNK2A2P19784 350 aaPredicted RBP13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ITPKBP27987 946 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ADH7P40394 386 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 PSMD4P55036 377 aaKnown RBP13.64□□□□□ -0.23
UBAP1-202ENST00000359544 SCAND1P57086 179 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 RPS15P62841 145 aaKnown RBP13.64□□□□□ -0.23
UBAP1-202ENST00000359544 LY6G6FQ5SQ64 297 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ARHGAP11AQ6P4F7 1023 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 C5orf46Q6UWT4 87 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 SLC16A13Q7RTY0 426 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 OR51S1Q8NGJ8 323 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 SEC11CQ9BY50 192 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ZDHHC5Q9C0B5 715 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 PCBD2Q9H0N5 130 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 C20orf141Q9NUB4 165 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 FBXL4Q9UKA2 621 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 A0A0G2JN53 185 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 DUXAA6NLW8 204 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 MAGEB4O15481 346 aaPredicted RBP13.64□□□□□ -0.23
UBAP1-202ENST00000359544 OR1F1O43749 312 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 LILRB5O75023 590 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 GTF2F2P13984 249 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 DLSTP36957 453 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ST8SIA6P61647 398 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 SRSF4Q08170 494 aaKnown RBP13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ECH1Q13011 328 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 TDGQ13569 410 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 SLC9A5Q14940 896 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 VITQ6UXI7 678 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF813Q6ZN06 617 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF836Q6ZNA1 936 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 FRRS1Q6ZNA5 592 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 DPPA4Q7L190 304 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 DND1Q8IYX4 353 aaKnown RBP13.64□□□□□ -0.23
UBAP1-202ENST00000359544 NRSN1Q8IZ57 195 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 STEAP2Q8NFT2 490 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 ADAMTS15Q8TE58 950 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 SMARCD2Q92925 531 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 BPIFA2Q96DR5 249 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 LMLNQ96KR4 655 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 TCF7L1Q9HCS4 588 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 NIT2Q9NQR4 276 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 GDE1Q9NZC3 331 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 CA14Q9ULX7 337 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 MYO15AQ9UKN7 3530 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 DMDP11532 3685 aa13.64□□□□□ -0.23
UBAP1-202ENST00000359544 TECTAO75443 2155 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 C17orf113A0A1B0GUU1 675 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 MEX3AA1L020 520 aaKnown RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 SCAMP1O15126 338 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 FGF16O43320 207 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 FCMRO60667 390 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 PRKRAO75569 313 aaKnown RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ZIC2O95409 532 aaPredicted RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 PPP1R3DO95685 299 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 AGR2O95994 175 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 MELTFP08582 738 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 NDUFS1P28331 727 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ZXDAP98168 799 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 GGTLC2Q14390 218 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ENPP7Q6UWV6 458 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 DCUN1D3Q8IWE4 304 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 OR5M8Q8NGP6 311 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 OR2A12Q8NGT7 310 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ZMYND19Q96E35 227 aaPredicted RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 CNRIP1Q96F85 164 aaPredicted RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 LRFN5Q96NI6 719 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 POFUT1Q9H488 388 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 DTX4Q9Y2E6 619 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF337Q9Y3M9 751 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 USP34Q70CQ2 3546 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 CLEC3AO75596 197 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 AKR7A3O95154 331 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 OLFM2O95897 454 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 OR4E1P0C645 316 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ELFN1P0C7U0 828 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 TIMP2P16035 220 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ABOP16442 354 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 MPIP34949 423 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 MC3RP41968 323 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 ZNF136P52737 540 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 AKR1C2P52895 323 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 SNRPEP62304 92 aaKnown RBP13.63□□□□□ -0.23
UBAP1-202ENST00000359544 AKR1C1Q04828 323 aa13.63□□□□□ -0.23
UBAP1-202ENST00000359544 LTBQ06643 244 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms