RNA–Protein interactions for RNA: ENST00000358966.6

GGPS1-202, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene GGPS1, Length 2,740 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-202ENST00000358966 ZPLD1Q8TCW7 415 aa11.5□□□□□ -0.57
GGPS1-202ENST00000358966 DUSP19Q8WTR2 217 aa11.5□□□□□ -0.57
GGPS1-202ENST00000358966 RBPMSQ93062 196 aaKnown RBP11.5□□□□□ -0.57
GGPS1-202ENST00000358966 TMEM203Q969S6 136 aa11.5□□□□□ -0.57
GGPS1-202ENST00000358966 LINC00052Q96N35 136 aa11.5□□□□□ -0.57
GGPS1-202ENST00000358966 CNOT2Q9NZN8 540 aaKnown RBP11.5□□□□□ -0.57
GGPS1-202ENST00000358966 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
GGPS1-202ENST00000358966 PCDHGB2Q9Y5G2 931 aa11.5□□□□□ -0.57
GGPS1-202ENST00000358966 EXPH5Q8NEV8 1989 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 A0A087WUJ7 227 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 SHISA8B8ZZ34 492 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 PRODHO43272 600 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 SOX30O94993 753 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 TACR3P29371 465 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 FOXK2Q01167 660 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 CRMP1Q14194 572 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 TFAP2EQ6VUC0 442 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 LINC00114Q6XXX2 140 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 CDK20Q8IZL9 346 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 OR6M1Q8NGM8 313 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 OR4K13Q8NH42 304 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 GATAD2BQ8WXI9 593 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 KTI12Q96EK9 354 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 C1QTNF6Q9BXI9 259 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 CDCA4Q9BXL8 241 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 SHARPINQ9H0F6 387 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 SLC35A3Q9Y2D2 325 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 ELOA3DA6NLF2 546 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 VSTM2BA6NLU5 285 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 BLOC1S5-TXNDC5H3BN57 136 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 FGF5P12034 268 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 MYL9P24844 172 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 RGS6P49758 472 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 PSMD4P55036 377 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 BIKQ13323 160 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 ZNF791Q3KP31 576 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 ELOA3BQ3SY89 546 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 AADACL4Q5VUY2 407 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 LIPKQ5VXJ0 399 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 LYPD4Q6UWN0 246 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 CXXC5Q7LFL8 322 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 CPEB2Q7Z5Q1 589 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 MARCH9Q86YJ5 346 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 RNF113BQ8IZP6 322 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 ELOA3Q8NG57 546 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 MOSPD2Q8NHP6 518 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 ART5Q96L15 291 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 LPAR4Q99677 370 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 RACGAP1Q9H0H5 632 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 ESRP2Q9H6T0 727 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 KRCC1Q9NPI7 259 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 KLHL21Q9UJP4 597 aa11.49□□□□□ -0.57
GGPS1-202ENST00000358966 LSM2Q9Y333 95 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 PTRH2Q9Y3E5 179 aaKnown RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 COL27A1Q8IZC6 1860 aaPredicted RBP11.49□□□□□ -0.57
GGPS1-202ENST00000358966 AIREO43918 545 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 OR2J2O76002 312 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 WDPCPO95876 746 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 DUSP3P51452 185 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 CTBP2P56545 445 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 RPS7P62081 194 aaKnown RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 GRK1Q15835 563 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 OTPQ5XKR4 325 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 FAM198BQ6UWH4 519 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 SLC46A3Q7Z3Q1 461 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 BRIX1Q8TDN6 353 aaKnown RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 NPFFR2Q9Y5X5 522 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 PTPRZ1P23471 2315 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 CPAMD8Q8IZJ3 1885 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 GATCO43716 136 aaKnown RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 LALBAP00709 142 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 F13BP05160 661 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 UMODP07911 640 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 NUBP1P53384 320 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 HCCSP53701 268 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 LTBQ06643 244 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 TAB1Q15750 504 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 TIGD3Q6B0B8 471 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 ATG4DQ86TL0 474 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 CMIPQ8IY22 773 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 CLDN22Q8N7P3 220 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 SETD6Q8TBK2 473 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 ZNRF4Q8WWF5 429 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 RASD2Q96D21 266 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 ERMAPQ96PL5 475 aaPredicted RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 POLR2J2Q9GZM3 115 aaKnown RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 CCDC86Q9H6F5 360 aaKnown RBP11.48□□□□□ -0.57
GGPS1-202ENST00000358966 EDARQ9UNE0 448 aa11.48□□□□□ -0.57
GGPS1-202ENST00000358966 CEP250Q9BV73 2442 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SMIM30A4D0T7 59 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 FAM171A2A8MVW0 826 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 ADAM10O14672 748 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 MYL12BO14950 172 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 RRASP10301 218 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 SFTPCP11686 197 aa11.47□□□□□ -0.57
GGPS1-202ENST00000358966 PIPP12273 146 aaPredicted RBP11.47□□□□□ -0.57
GGPS1-202ENST00000358966 CD59P13987 128 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms