RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RAB11BQ15907 218 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 THSD4Q6ZMP0 1018 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 STOML3Q8TAV4 291 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 NRIP3Q9NQ35 241 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 NCDNQ9UBB6 729 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 TTLL8A6PVC2 850 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 HCKP08631 526 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 RD3LP0DJH9 198 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 OR3A2P47893 321 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF41P51814 821 aaPredicted RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 CHAF1BQ13112 559 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 KIAA0895LQ68EN5 471 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 KIAA0907Q7Z7F0 614 aaPredicted RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 RASGRP3Q8IV61 690 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 SLC35F3Q8IY50 421 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 CA13Q8N1Q1 262 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 OR6N1Q8NGY5 312 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 THAP6Q8TBB0 222 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 BRIX1Q8TDN6 353 aaKnown RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 MAFIPQ8WZ33 124 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ATF6BQ99941 703 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ULBP3Q9BZM4 244 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 SCP2D1Q9UJQ7 156 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 IGKV1-8A0A0C4DH67 115 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 A0A1B0GV50 99 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 PRAMEF27A3QJZ7 478 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 GPRIN2O60269 458 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 CBR1P16152 277 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 CD38P28907 300 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 PPP1CAP62136 330 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 SRSF5Q13243 272 aaKnown RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 SLC25A35Q3KQZ1 300 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF770Q6IQ21 691 aaPredicted RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 KIRREL2Q6UWL6 708 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 GCDHQ92947 438 aaPredicted RBP11.26□□□□□ -0.61
COL20A1-201ENST00000358894 PPP1R14AQ96A00 147 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 OR2A5Q96R48 311 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ELOVL3Q9HB03 270 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ISYNA1Q9NPH2 558 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 LHX9Q9NQ69 397 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 ASF1BQ9NVP2 202 aa11.26□□□□□ -0.61
COL20A1-201ENST00000358894 A0A1B0GVI7 797 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 LGALS8O00214 317 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 COL9A1P20849 921 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 FXYD6P3P58550 94 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 KCNAB1Q14722 419 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 NKPD1Q17RQ9 610 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 LSRQ86X29 649 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 PLXDC1Q8IUK5 500 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 OR13C3Q8NGS6 347 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 CUTCQ9NTM9 273 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 GMEB2Q9UKD1 530 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 FAM221BA6H8Z2 402 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 LALBAP00709 142 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF250P15622 560 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 HOXB9P17482 250 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 PRSS3P35030 304 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 OPCMLQ14982 345 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ZIC1Q15915 447 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 AADACL4Q5VUY2 407 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 PRSS42Q7Z5A4 293 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 OR2L13Q8N349 312 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 C12orf45Q8N5I9 185 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 C16orf52Q8NHV5 167 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 MRPL38Q96DV4 380 aaKnown RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 POTEKPQ9BYX7 375 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 NOX3Q9HBY0 568 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 PLEKHB1Q9UF11 243 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 TRABD2BA6NFA1 517 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 C1orf196B1AJZ1 125 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ACOT7O00154 380 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 PRICKLE3O43900 615 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 AMY2AP04746 511 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 CD14P08571 375 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 CBX5P45973 191 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 EIF2B1Q14232 305 aaKnown RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF169Q14929 603 aaPredicted RBP11.25□□□□□ -0.61
COL20A1-201ENST00000358894 FAM69BQ5VUD6 431 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 VASNQ6EMK4 673 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF425Q6IV72 752 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 KDM8Q8N371 416 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 DNAAF1Q8NEP3 725 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF417Q8TAU3 575 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 TCTN2Q96GX1 697 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 CFHR5Q9BXR6 569 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 MFFQ9GZY8 342 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 LIN7BQ9HAP6 207 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 TRAPPC4Q9Y296 219 aa11.25□□□□□ -0.61
COL20A1-201ENST00000358894 PEX14O75381 377 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 LIPCP11150 499 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CSNK1EP49674 416 aaKnown RBP11.24□□□□□ -0.61
COL20A1-201ENST00000358894 VEGFCP49767 419 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 AKR1C2P52895 323 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 AKR1C1Q04828 323 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 DPY19L2P2Q6ZN68 376 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 ZNF584Q8IVC4 421 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 ZFP82Q8N141 532 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 CD300LFQ8TDQ1 290 aa11.24□□□□□ -0.61
COL20A1-201ENST00000358894 MAN2C1Q9NTJ4 1040 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms