RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 IFNGR1P15260 489 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 PPP3CBP16298 524 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF28P17035 718 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 GJA4P35212 333 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 TPMTP51580 245 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZP1P60852 638 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SPOCK1Q08629 439 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 DYRK1AQ13627 763 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 KLF9Q13886 244 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 PRAMEF8Q5VWM4 474 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 PRAMEF7Q5VXH5 474 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 TANGO2Q6ICL3 276 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 TMEM88Q6PEY1 159 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 HAGHLQ6PII5 290 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SLC35F3Q8IY50 421 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 INO80EQ8NBZ0 244 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 OR11G2Q8NGC1 345 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 OR4C16Q8NGL9 310 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZPLD1Q8TCW7 415 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 CCDC107Q8WV48 283 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 TTC9Q92623 222 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 MMABQ96EY8 250 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 AHCYL2Q96HN2 611 aaKnown RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF681Q96N22 645 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SYT4Q9H2B2 425 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ELL3Q9HB65 397 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 PCDHB16Q9NRJ7 776 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 UPB1Q9UBR1 384 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 OR5V1Q9UGF6 321 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ANAPC1Q9H1A4 1944 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF705EA8MWA4 302 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 IGF2P01344 180 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 DCNP07585 359 aaKnown RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 MYOGP15173 224 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 CXCR1P25024 350 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 POU3F4P49335 361 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 LUMP51884 338 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 HLXQ14774 488 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 RBMS2Q15434 407 aaKnown RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 B3GNTL1Q67FW5 361 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 STAC2Q6ZMT1 411 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 THAP6Q8TBB0 222 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 FAM3CQ92520 227 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 PGLYRP3Q96LB9 341 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 TMEM74BQ9NUR3 256 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 CGGBP1Q9UFW8 167 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 FBXO4Q9UKT5 387 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 C19orf53Q9UNZ5 99 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 PCDHGA5Q9Y5G8 931 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 HRH3Q9Y5N1 445 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 FARS2O95363 451 aaKnown RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 APBB3O95704 486 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 AKAIN1P0CW23 69 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 HOXB2P14652 356 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 IL9P15248 144 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 CD34P28906 385 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SNRPNP63162 240 aaKnown RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 EEF1A1P68104 462 aaKnown RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 EFNB1P98172 346 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 GPR18Q14330 331 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF169Q14929 603 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 RAB11BQ15907 218 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 Q499Y3 187 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 OVCH1Q7RTY7 1134 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 C12orf45Q8N5I9 185 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ACBD4Q8NC06 268 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 ZNF485Q8NCK3 441 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 STEAP2Q8NFT2 490 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 OR10AC1Q8NH08 325 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 FAM174AQ8TBP5 190 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 GPR148Q8TDV2 347 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SCARB1Q8WTV0 552 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 OR1E3Q8WZA6 343 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 UBL7Q96S82 380 aaPredicted RBP6.02□□□□□ -1.45
CSDE1-203ENST00000358528 AIFM2Q9BRQ8 373 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 TMEM106CQ9BVX2 250 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SLC7A5P2Q9GIP4 190 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 IFT46Q9NQC8 304 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 FLRT3Q9NZU0 649 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 CES1P1Q9UKY3 287 aa6.02□□□□□ -1.45
CSDE1-203ENST00000358528 SNRNP200O75643 2136 aaKnown RBP6.01□□□□□ -1.45
CSDE1-203ENST00000358528 MDC1Q14676 2089 aaKnown RBP6.01□□□□□ -1.45
CSDE1-203ENST00000358528 A0A1B0GUH1 482 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 MCRIP1C9JLW8 97 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 SCDO00767 359 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 AGPAT2O15120 278 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 GPRIN2O60269 458 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 CDC40O60508 579 aaKnown RBP eCLIP6.01□□□□□ -1.45
CSDE1-203ENST00000358528 THBS1P07996 1170 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 GIPP09681 153 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-203ENST00000358528 RAB40ALP0C0E4 278 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 IL32P24001 234 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 PEBP1P30086 187 aaKnown RBP6.01□□□□□ -1.45
CSDE1-203ENST00000358528 DRD3P35462 400 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 DIO1P49895 249 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 ACSM1Q08AH1 577 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 FBXO42Q6P3S6 717 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 GLDNQ6ZMI3 551 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-203ENST00000358528 RHOUQ7L0Q8 258 aa6.01□□□□□ -1.45
CSDE1-203ENST00000358528 TMPRSS9Q7Z410 1059 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms