RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 ADRA2CP18825 462 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 PAX6P26367 422 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 GGTA1PQ4G0N0 100 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 SLC35D3Q5M8T2 416 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR4C5Q8NGB2 326 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 MED18Q9BUE0 208 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 SEMA4CQ9C0C4 833 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 FBXO8Q9NRD0 319 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 ZFAND5O76080 213 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 MMP7P09237 267 aaPredicted RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 MAKP20794 623 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 ITGB7P26010 798 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 HBA1P69905 142 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 RTP2Q5QGT7 225 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 WDTC1Q8N5D0 677 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 SLC6A18Q96N87 628 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 TMEM131LA2VDJ0 1609 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 NSG1A0A0A6YYJ2 146 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 H3BML4 177 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 CHRM2P08172 466 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
SMC4-202ENST00000357388 TEKQ02763 1124 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 TESK1Q15569 626 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR7A5Q15622 319 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 TOR2AQ5JU69 321 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 FAM182AQ5T1J6 154 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 PM20D1Q6GTS8 502 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 UQCC3Q6UW78 93 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 PPP1R3BQ86XI6 285 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 CNEP1R1Q8N9A8 125 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 OR51A4Q8NGJ6 313 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 DPF1Q92782 380 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 FKRPQ9H9S5 495 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 SPEF2Q9C093 1822 aa11.93□□□□□ -0.5
SMC4-202ENST00000357388 TIMP2P16035 220 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 GM2AP17900 193 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 TBPP20226 339 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 FOXA1P55317 472 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 GRB2P62993 217 aaKnown RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 Q6ZTK2 550 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 MBOAT2Q6ZWT7 520 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 APCDD1Q8J025 514 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 HSD17B11Q8NBQ5 300 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 C2CD4CQ8TF44 421 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 CHAC2Q8WUX2 184 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 OR51I2Q9H344 312 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 WDR76Q9H967 626 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 VSX1Q9NZR4 365 aaPredicted RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 COL1A1P02452 1464 aaPredicted RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 hCG_1809904A0A1W2PP81 198 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 A0A1W2PPE2 198 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 A0A1W2PR64 198 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 A0A1W2PRV1 198 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 HEXAP06865 529 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 CTRB1P17538 263 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 FGF7P21781 194 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 RPS19P39019 145 aaKnown RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 P2RY2P41231 377 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 CLINT1Q14677 625 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 CTRB2Q6GPI1 263 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 TMEM25Q86YD3 366 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 GHSRQ92847 366 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 PDLIM5Q96HC4 596 aaKnown RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 OR52A1Q9UKL2 312 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 TRAV27A0A087WT01 109 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 SOCS6O14544 535 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 YKT6O15498 198 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 EIF4EP06730 217 aaKnown RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 CCR7P32248 378 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 DEFB133Q30KQ1 61 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 DEFB110Q30KQ9 67 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 NHSL2Q5HYW2 709 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 ADGRF3Q8IZF5 1079 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 OR6K3Q8NGY3 331 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 ABHD6Q9BV23 337 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 TM7SF3Q9NS93 570 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 MED9Q9NWA0 146 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 RPH3ALQ9UNE2 315 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 ZNF724A8MTY0 619 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 OR10J4P0C629 311 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 F3P13726 295 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 DUSP1P28562 367 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 CD70P32970 193 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 SOX18P35713 384 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 PTRH1Q86Y79 214 aaKnown RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 SFT2D1Q8WV19 159 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 SLC46A1Q96NT5 459 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 DCLRE1CQ96SD1 692 aaKnown RBP11.92□□□□□ -0.5
SMC4-202ENST00000357388 OR14J1Q9UGF5 321 aa11.92□□□□□ -0.5
SMC4-202ENST00000357388 FAM155AB1AL88 458 aaPredicted RBP11.91□□□□□ -0.5
SMC4-202ENST00000357388 OR8U8P0C7N1 319 aa11.91□□□□□ -0.5
SMC4-202ENST00000357388 HNRNPA3P51991 378 aaKnown RBP11.91□□□□□ -0.5
SMC4-202ENST00000357388 TPPP2P59282 170 aa11.91□□□□□ -0.5
SMC4-202ENST00000357388 CDK5Q00535 292 aa11.91□□□□□ -0.5
SMC4-202ENST00000357388 SMN1Q16637 294 aaKnown RBP11.91□□□□□ -0.5
SMC4-202ENST00000357388 DYNC2LI1Q8TCX1 351 aa11.91□□□□□ -0.5
SMC4-202ENST00000357388 PCNPQ8WW12 178 aaKnown RBP11.91□□□□□ -0.5
SMC4-202ENST00000357388 SLC25A46Q96AG3 418 aa11.91□□□□□ -0.5
SMC4-202ENST00000357388 POFUT1Q9H488 388 aa11.91□□□□□ -0.5
SMC4-202ENST00000357388 SPACA1Q9HBV2 294 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms