RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAM74A3Q4VXF1 159 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 SSX7Q7RTT5 188 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 NANOGP1Q8N7R0 232 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 DTWD2Q8NBA8 298 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 GHSRQ92847 366 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 PAPLNO95428 1278 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 ABCD3P28288 659 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 PRDX3P30048 256 aaKnown RBP6.11□□□□□ -1.43
VPS13B-202ENST00000357162 KIAA0895LQ68EN5 471 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 OR4E2Q8NGC2 313 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CTDSP1Q9GZU7 261 aa6.11□□□□□ -1.43
VPS13B-202ENST00000357162 CCL22O00626 93 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ALDOCP09972 364 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SP3Q02447 781 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PRAMEF18Q5VWM3 479 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 BPHLQ86WA6 291 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SLC38A6Q8IZM9 456 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ACVR1CQ8NER5 493 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 OR52E2Q8NGJ4 325 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 HS3ST2Q9Y278 367 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF354AO60765 605 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SOD2P04179 222 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CHRM5P08912 532 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 GGT5P36269 586 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 GLYR1Q49A26 553 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SLC22A6Q4U2R8 563 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 STEAP1BQ6NZ63 245 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CISD2Q8N5K1 135 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 OR4K15Q8NH41 348 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 C12orf57Q99622 126 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SUCNR1Q9BXA5 334 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 LOC105369274A0A096LPK9 316 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SNCGO76070 127 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 WASP42768 502 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 DUSP3P51452 185 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 FBXW12Q6X9E4 464 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 OR4N4Q8N0Y3 316 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 OR51T1Q8NGJ9 327 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 OR5M8Q8NGP6 311 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 NTNG2Q96CW9 530 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 TRPM3Q9HCF6 1732 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF705GA8MUZ8 300 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ACTL6BO94805 426 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ADH7P40394 386 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CASP9P55211 416 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 NAA40Q86UY6 237 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 RCBTB1Q8NDN9 531 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 RAB8BQ92930 207 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 GCDHQ92947 438 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 WDR92Q96MX6 357 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CABLES2Q9BTV7 478 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 HRH4Q9H3N8 390 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PRSS16Q9NQE7 514 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PURGQ9UJV8 347 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 B4GAT1O43505 415 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 DUX1O43812 170 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 TM4SF1P30408 202 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ARSDP51689 593 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SNRPD2P62316 118 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 RAB30Q15771 203 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 FAM74A1Q5RGS3 127 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ARHGAP40Q5TG30 622 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 VITQ6UXI7 678 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 MMP26Q9NRE1 261 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 DRGXA6NNA5 263 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 KLK8O60259 260 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 HNF1BP35680 557 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PREPP48147 710 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 BAXQ07812 192 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ATPAF1Q5TC12 328 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 RGMBQ6NW40 437 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 FBXL12Q9NXK8 326 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 LIMS3P0CW19 117 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 LIMS4P0CW20 117 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CPMP14384 443 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SYN1P17600 705 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ACVRL1P37023 503 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 RPL34P49207 117 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CTBSQ01459 385 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF239Q16600 458 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ENTPD8Q5MY95 495 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PHYHD1Q5SRE7 291 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PARGQ86W56 976 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF595Q8IYB9 648 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ALG12Q9BV10 488 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 EHFQ9NZC4 300 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 KCNS2Q9ULS6 477 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 SLC7A7Q9UM01 511 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 KCTD3Q9Y597 815 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 A0A1B0GTW7 788 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF705FA8MVS1 300 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 TBX19O60806 448 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ADH4P08319 380 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ACSM4P0C7M7 580 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF705DP0CH99 300 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ZNF705BP0CI00 300 aaPredicted RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 ALKBH1Q13686 389 aaKnown RBP6.1□□□□□ -1.43
VPS13B-202ENST00000357162 PLA1AQ53H76 456 aa6.1□□□□□ -1.43
VPS13B-202ENST00000357162 CYB5R2Q6BCY4 276 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms