RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 C18orf63Q68DL7 685 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 PRR27Q6MZM9 219 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 OR7D2Q96RA2 312 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 XRN1Q8IZH2 1706 aaKnown RBP16.03■□□□□ 0.16
COL27A1-201ENST00000356083 OR10J5Q8NHC4 309 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 RNF170Q96K19 258 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 NPY6RQ99463 290 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 CLSTN3Q9BQT9 956 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 WASH6PQ9NQA3 447 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 MYO7BQ6PIF6 2116 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF785A8K8V0 405 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 KLRC4-KLRK1H3BQV0 150 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 GPR39O43194 453 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 EEDO75530 441 aaKnown RBP16.03■□□□□ 0.16
COL27A1-201ENST00000356083 SLC5A2P31639 672 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 GK3PQ14409 553 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 DEFB109BQ30KR1 87 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 CLEC14AQ86T13 490 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 FAXDC2Q96IV6 333 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 SLC29A1Q99808 456 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF436Q9C0F3 470 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-201ENST00000356083 SOX18P35713 384 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 PGAP1Q75T13 922 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 TSPYL5Q86VY4 417 aaPredicted RBP16.03■□□□□ 0.16
COL27A1-201ENST00000356083 BRIX1Q8TDN6 353 aaKnown RBP16.03■□□□□ 0.16
COL27A1-201ENST00000356083 OCEL1Q9H607 264 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 GJA4P35212 333 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 CYP1B1Q16678 543 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 PNCKQ6P2M8 343 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 PLXDC2Q6UX71 529 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 ZNF597Q96LX8 424 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 PADI1Q9ULC6 663 aa16.03■□□□□ 0.16
COL27A1-201ENST00000356083 RFPL3O75679 317 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 GLI4P10075 376 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 HMGCLP35914 325 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 PSMB3P49720 205 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 RPS16P62249 146 aaKnown RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 MFGE8Q08431 387 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 MRPL2Q5T653 305 aaKnown RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 METAP1DQ6UB28 335 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 CISD2Q8N5K1 135 aaKnown RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 HSD17B11Q8NBQ5 300 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 DMRT3Q9NQL9 472 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 MRPS2Q9Y399 296 aaKnown RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 AMTP48728 403 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 RAP2BP61225 183 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 UBE2NLQ5JXB2 153 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 RTP2Q5QGT7 225 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 LETMD1Q6P1Q0 360 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 LMNTD1Q8N9Z9 388 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.02■□□□□ 0.165e-11■■■□□ 14.9
COL27A1-201ENST00000356083 DNAJB6O75190 326 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 MARCH8Q5T0T0 291 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 L3MBTL4Q8NA19 623 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 SIMC1Q8NDZ2 872 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 FBXL2Q9UKC9 423 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 AQP9O43315 295 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 RAB15P59190 212 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 PITX1P78337 314 aaPredicted RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 EIF4HQ15056 248 aaKnown RBP16.02■□□□□ 0.16
COL27A1-201ENST00000356083 MEP1BQ16820 701 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 ABHD6Q9BV23 337 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 KCND3Q9UK17 655 aa16.02■□□□□ 0.16
COL27A1-201ENST00000356083 LYRM1O43325 122 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 CEBPDP49716 269 aaPredicted RBP16.02■□□□□ 0.15
COL27A1-201ENST00000356083 PAGE3Q5JUK9 113 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 RHEBL1Q8TAI7 183 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 SLC35B2Q8TB61 432 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 QRSL1Q9H0R6 528 aaKnown RBP16.02■□□□□ 0.15
COL27A1-201ENST00000356083 GAB2Q9UQC2 676 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 SH3BP2P78314 561 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 LYPD8Q6UX82 237 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ZDHHC24Q6UX98 284 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ADGRG5Q8IZF4 528 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ISYNA1Q9NPH2 558 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ATP13A2Q9NQ11 1180 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF230Q9UIE0 474 aaPredicted RBP16.02■□□□□ 0.15
COL27A1-201ENST00000356083 Q9Y3F1 56 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 LMTK2Q8IWU2 1503 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 GPR37O15354 613 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ADAMTS16Q8TE57 1224 aa16.02■□□□□ 0.15
COL27A1-201ENST00000356083 ZNF331Q9NQX6 463 aaPredicted RBP16.02■□□□□ 0.15
COL27A1-201ENST00000356083 RFXAPO00287 272 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 NRG2O14511 850 aaPredicted RBP16.01■□□□□ 0.15
COL27A1-201ENST00000356083 PIAS2O75928 621 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 OR51H1Q8NH63 302 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 M1APQ8TC57 530 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 PIGTQ969N2 578 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 ARSGQ96EG1 525 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 NACAE9PAV3 2078 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 METTL15P1P0C7V9 234 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 DNAJB1P25685 340 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 CYB561P49447 251 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 DOC2BQ14184 412 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 IDO2Q6ZQW0 420 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 B3GNT7Q8NFL0 401 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 NUDT9Q9BW91 350 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 NUBP2Q9Y5Y2 271 aa16.01■□□□□ 0.15
COL27A1-201ENST00000356083 OR5K3A6NET4 321 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms