RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 DLX5P56178 289 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 HENMT1Q5T8I9 393 aaKnown RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 OR6T1Q8NGN1 323 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 GOT1L1Q8NHS2 421 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 PIGTQ969N2 578 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 OBP2AQ9NY56 170 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 HMGA1P17096 107 aaKnown RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 EDDM3BP56851 147 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 DPY19L2P2Q6ZN68 376 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 UPRTQ96BW1 309 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 FGGYQ96C11 551 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 AMBRA1Q9C0C7 1298 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 HIPK2Q9H2X6 1198 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 GFOD1Q9NXC2 390 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 MRPS2Q9Y399 296 aaKnown RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 OR5K3A6NET4 321 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF705FA8MVS1 300 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF705DP0CH99 300 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF705BP0CI00 300 aaPredicted RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 EIF1P41567 113 aaKnown RBP12.2□□□□□ -0.46
SCN8A-202ENST00000355133 NXNL2Q5VZ03 156 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 CST9LP1Q5W188 147 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 TMEM71Q6P5X7 295 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 IDO2Q6ZQW0 420 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 SIRT6Q8N6T7 355 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 PFN4Q8NHR9 129 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 ABHD4Q8TB40 342 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 TMEM174Q8WUU8 243 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 NIPSNAP1Q9BPW8 284 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 TBC1D29Q9UFV1 150 aa12.2□□□□□ -0.46
SCN8A-202ENST00000355133 SCN11AQ9UI33 1791 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 C5P01031 1676 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 NKX6-1P78426 367 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 MEP1BQ16820 701 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 SHEQ5VZ18 495 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 KDM8Q8N371 416 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF454Q8N9F8 522 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 IFI44Q8TCB0 444 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 DAZAP1Q96EP5 407 aaKnown RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 LIN37Q96GY3 246 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 SUCNR1Q9BXA5 334 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 FOXQ1Q9C009 403 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 MYH15Q9Y2K3 1946 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 TMEM82A0PJX8 343 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 AKR7A3O95154 331 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 KIAA1024LP59773 190 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 Q499Y3 187 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 HACD4Q5VWC8 232 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 RSPO2Q6UXX9 243 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 SYT9Q86SS6 491 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF546Q86UE3 836 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 WASH6PQ9NQA3 447 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF225Q9UK10 706 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 CLDN24A6NM45 220 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 PLPP1O14494 284 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 SELENOFO60613 162 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 SNCAP37840 140 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 TATDN3Q17R31 274 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 FAM71E1Q6IPT2 247 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 Q6ZTK2 550 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 TUBB1Q9H4B7 451 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 C19orf12Q9NSK7 152 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 KIF25Q9UIL4 384 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 SLC22A23A1A5C7 686 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 NRG2O14511 850 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 RPA2P15927 270 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 PLK5Q496M5 336 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 METRNLQ641Q3 311 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF419Q96HQ0 510 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 UBR2Q8IWV8 1755 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 CHD4Q14839 1912 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 A8MVM7 634 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 MSTNO14793 375 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 GRPP07492 148 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 RPL35P42766 123 aaKnown RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 EXT1Q16394 746 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 TMEM240Q5SV17 173 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 C1orf140Q5VVS0 124 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 C6orf15Q6UXA7 325 aaPredicted RBP12.19□□□□□ -0.46
SCN8A-202ENST00000355133 MAVSQ7Z434 540 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 LAX1Q8IWV1 398 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 ZNF687Q8N1G0 1237 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 BATF2Q8N1L9 274 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 OR4A16Q8NH70 328 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 PATE1Q8WXA2 126 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 BIN3Q9NQY0 253 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 PCDHGA5Q9Y5G8 931 aa12.19□□□□□ -0.46
SCN8A-202ENST00000355133 RAB27BO00194 218 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 MED6O75586 246 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 NXPH3O95157 252 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 SNRNP70P08621 437 aaKnown RBP12.18□□□□□ -0.46
SCN8A-202ENST00000355133 RNLSQ5VYX0 342 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 DCXRQ7Z4W1 244 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 ENTHD1Q8IYW4 607 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 RDH10Q8IZV5 341 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 BHLHE23Q8NDY6 225 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 UCN3Q969E3 161 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 PBX4Q9BYU1 374 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 PSORS1C1Q9UIG5 152 aa12.18□□□□□ -0.46
SCN8A-202ENST00000355133 URB1O60287 2271 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms