RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 RPS15P62841 145 aaKnown RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF169Q14929 603 aaPredicted RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZNHIT3Q15649 155 aaPredicted RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 CLVS2Q5SYC1 327 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 STPG1Q5TH74 334 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 LPCAT3Q6P1A2 487 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 ZCCHC10Q8TBK6 192 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PHYHIPLQ96FC7 376 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 SMAD5Q99717 465 aaKnown RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 APOOQ9BUR5 198 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 SRMSQ9H3Y6 488 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 CCDC86Q9H6F5 360 aaKnown RBP10.42□□□□□ -0.74
CAPN9-202ENST00000354537 PCDHB16Q9NRJ7 776 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 CREBZFQ9NS37 354 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 RASL12Q9NYN1 266 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 DPP7Q9UHL4 492 aa10.42□□□□□ -0.74
CAPN9-202ENST00000354537 TMEM212A6NML5 194 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 PHYHO14832 338 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 CBX7O95931 251 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 CD8AP01732 235 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ITGB2P05107 769 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 VIPR2P41587 438 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 FLI1Q01543 452 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 EGR3Q06889 387 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ENPP2Q13822 863 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 COL9A2Q14055 689 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF345Q14585 488 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 EMC4Q5J8M3 183 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 FCRL6Q6DN72 434 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 FAAP20Q6NZ36 180 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 KIRREL2Q6UWL6 708 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ZAR1Q86SH2 424 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 TMEM17Q86X19 198 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 CDC20BQ86Y33 519 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF440Q8IYI8 595 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 CLRN3Q8NCR9 226 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 OR52B4Q8NGK2 314 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 OR6K6Q8NGW6 343 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 GPR148Q8TDV2 347 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 OIT3Q8WWZ8 545 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 SMARCD2Q92925 531 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF707Q96C28 371 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 WDR89Q96FK6 387 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ADAD1Q96M93 576 aaKnown RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 DEFB118Q96PH6 123 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 SLC25A21Q9BQT8 299 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ZNF416Q9BWM5 594 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 FRRS1LQ9P0K9 344 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 MRM2Q9UI43 246 aaKnown RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 GPR160Q9UJ42 338 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ADAM18Q9Y3Q7 739 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 OTOL1A6NHN0 477 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 DNASE2O00115 360 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 LGALS8O00214 317 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 EIF4E2O60573 245 aaKnown RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 SRPX2O60687 465 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ADAM11O75078 769 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 RLN1P04808 185 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 SLC25A4P12235 298 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ACTBP60709 375 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 SNRPNP63162 240 aaKnown RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 ACTG1P63261 375 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 RASGEF1BQ0VAM2 473 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 EXOSC7Q15024 291 aaKnown RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 LIPNQ5VXI9 398 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 FDX2Q6P4F2 183 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 UQCC3Q6UW78 93 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 MOB3CQ70IA8 216 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 TMPRSS12Q86WS5 348 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 TNFAIP8L1Q8WVP5 186 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 HMGB4Q8WW32 186 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 OR2M4Q96R27 311 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 COMMD4Q9H0A8 199 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 OBP2AQ9NY56 170 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 FBXL2Q9UKC9 423 aa10.41□□□□□ -0.74
CAPN9-202ENST00000354537 KLF2Q9Y5W3 355 aaPredicted RBP10.41□□□□□ -0.74
CAPN9-202ENST00000354537 CEP350Q5VT06 3117 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 SYNDIG1LA6NDD5 238 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 OR4C45A6NMZ5 311 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 PRR32B1ATL7 298 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 IDSB3KWA1 339 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 CTSVO60911 334 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 CTAG2O75638 210 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 CT62P0C5K7 136 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 PRSS3P35030 304 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 CTAG1AP78358 180 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 ID2Q02363 134 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 ETFDHQ16134 617 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 C2orf68Q2NKX9 166 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 LRFN4Q6PJG9 635 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 FIGLAQ6QHK4 219 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 NUP54Q7Z3B4 507 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 DGLUCYQ7Z3D6 616 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 JAZF1Q86VZ6 243 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 SFTPA1Q8IWL2 248 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 CCDC36Q8IYA8 594 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 KCNRGQ8N5I3 272 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 TMEM229BQ8NBD8 167 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 C7orf57Q8NEG2 295 aa10.4□□□□□ -0.74
CAPN9-202ENST00000354537 ST8SIA2Q92186 375 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms