RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 HIF3AQ9Y2N7 669 aa22.35■■□□□ 1.17
CPNE1-202ENST00000352393 PRAMEF2O60811 474 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 TPPPO94811 219 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 KLF8O95600 359 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-202ENST00000352393 AQP2P41181 271 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 IGLV3-21P80748 117 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-202ENST00000352393 CBFBQ13951 182 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 JAZF1Q86VZ6 243 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 BCORP1Q8N888 145 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 ELMOD3Q96FG2 381 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 TSSK2Q96PF2 358 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 TMPRSS13Q9BYE2 586 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 FKRPQ9H9S5 495 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 GPN1Q9HCN4 374 aaPredicted RBP22.34■■□□□ 1.17
CPNE1-202ENST00000352393 DZANK1Q9NVP4 752 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 FRRS1LQ9P0K9 344 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 EGFP01133 1207 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 APEHP13798 732 aaKnown RBP22.34■■□□□ 1.17
CPNE1-202ENST00000352393 NHLRC3Q5JS37 347 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 LIPNQ5VXI9 398 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 SIX5Q8N196 739 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 MEIOBQ8N635 442 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 LSM14AQ8ND56 463 aaKnown RBP22.34■■□□□ 1.17
CPNE1-202ENST00000352393 MOKQ9UQ07 419 aa22.34■■□□□ 1.17
CPNE1-202ENST00000352393 GLSO94925 669 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-202ENST00000352393 IGF2P01344 180 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 CD14P08571 375 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 HTR4Q13639 388 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 LRRN1Q6UXK5 716 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 ZNF595Q8IYB9 648 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 LIPHQ8WWY8 451 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 CCNL2Q96S94 520 aaPredicted RBP22.33■■□□□ 1.17
CPNE1-202ENST00000352393 ZNF224Q9NZL3 707 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 HCN3Q9P1Z3 774 aa22.33■■□□□ 1.17
CPNE1-202ENST00000352393 TPD52L2O43399 206 aaKnown RBP22.33■■□□□ 1.16
CPNE1-202ENST00000352393 TMIGD3P0DMS9 266 aaPredicted RBP22.33■■□□□ 1.16
CPNE1-202ENST00000352393 CSRP1P21291 193 aaKnown RBP22.33■■□□□ 1.16
CPNE1-202ENST00000352393 GPR3P46089 330 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 SOX2P48431 317 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 PSMA6P60900 246 aaKnown RBP22.33■■□□□ 1.16
CPNE1-202ENST00000352393 ZNF267Q14586 743 aaPredicted RBP22.33■■□□□ 1.16
CPNE1-202ENST00000352393 ZNF74Q16587 644 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 KANSL1Q7Z3B3 1105 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 CDC20BQ86Y33 519 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 DNAAF1Q8NEP3 725 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 CCDC74AQ96AQ1 378 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 SFXN2Q96NB2 322 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 SLC6A5Q9Y345 797 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 CLDN16Q9Y5I7 305 aa22.33■■□□□ 1.16
CPNE1-202ENST00000352393 OR6C65A6NJZ3 312 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 GRK6P43250 576 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 FAM198BQ6UWH4 519 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 CHMP1BQ7LBR1 199 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 GPAT4Q86UL3 456 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 TMPRSS12Q86WS5 348 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 ZNF440Q8IYI8 595 aa22.32■■□□□ 1.16
CPNE1-202ENST00000352393 RBPMSQ93062 196 aaKnown RBP22.32■■□□□ 1.16
CPNE1-202ENST00000352393 TRBV5-7A0A0A0MS05 114 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 A0A0A6YYC8 382 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 ELOA3DA6NLF2 546 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 BLOC1S5-TXNDC5H3BN57 136 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 I3L1I5 382 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 L7N2F9 121 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 RNH1P13489 461 aaKnown RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 ST6GAL1P15907 406 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 SDHAP31040 664 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 PGDP52209 483 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 CSRP2Q16527 193 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 ELOA3BQ3SY89 546 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 OR5M10Q6IEU7 315 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 KIAA1324Q6UXG2 1013 aaKnown RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 ATG4DQ86TL0 474 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 ELOA3Q8NG57 546 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 C16orf52Q8NHV5 167 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 GPBAR1Q8TDU6 330 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 SLC37A2Q8TED4 501 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 ADAD1Q96M93 576 aaKnown RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 MOGAT1Q96PD6 335 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 CERS4Q9HA82 394 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 OR10H1Q9Y4A9 318 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 SCAND1P57086 179 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 PLA2G7Q13093 441 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 KLHL26Q53HC5 615 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 C3P1Q6ZMU1 363 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 CLIP3Q96DZ5 547 aa22.31■■□□□ 1.16
CPNE1-202ENST00000352393 WDR89Q96FK6 387 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-202ENST00000352393 TRAV8-7A0A075B6U6 113 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 OR4C45A6NMZ5 311 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 ZNF254O75437 659 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 CDC123O75794 336 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-202ENST00000352393 SNAPC5O75971 98 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 TXNDC12O95881 172 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 ITPKBP27987 946 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 YPEL5P62699 121 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 LTBQ06643 244 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 WBP2NLQ6ICG8 309 aa22.3■■□□□ 1.16
CPNE1-202ENST00000352393 ZNF761Q86XN6 746 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-202ENST00000352393 ING1Q9UK53 422 aaPredicted RBP22.3■■□□□ 1.16
CPNE1-202ENST00000352393 hCG_1807616A0A1W2PRN6 198 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms